KEGG   Phreatobacter cathodiphilus: C6569_12200
Entry
C6569_12200       CDS       T05356                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
phr  Phreatobacter cathodiphilus
Brite
KEGG Orthology (KO) [BR:phr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:phr03021]
    C6569_12200 (rpoH)
Transcription machinery [BR:phr03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C6569_12200 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r3 HTH_3 HTH_11 Sigma70_r4_2 HTH_19 HTH_10 GntR HTH_Crp_2 HTH_28 HTH_23 PgaD HTH_20
Other DBs
NCBI-ProteinID: AVO45765
UniProt: A0A2S0NC95
LinkDB
Position
2496270..2497178
AA seq 302 aa
MAQTASLPILSAEAGLSRYLDEIRKFPMLQPQEEYMLAKRWREHGDSKAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKRFEPDKGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKKLFFNLRKAKSSISALEDGDLRPDQVEVIATKLGVEKQDVIDMNRRL
GGDASLNAPVREDGDGEWQDWLADDSDSQEAVLAREEETDNRRLALTRALGVLNERERII
FEERRLKDDPITLEELAERFGVSRERVRQIEVRAFEKVQDAVVKSIREIERPAAQPAQIA
AR
NT seq 909 nt   +upstreamnt  +downstreamnt
atggctcagactgcgtctcttcccatcctctccgccgaggcggggctgtcgcggtatctc
gacgagatccgcaagttccccatgcttcagccgcaggaggagtacatgctcgccaagcgc
tggcgcgaacacggcgacagcaaggcggcgcacaagctcgtcacctctcacctccggttg
gtcgccaagatcgccatgggctatcgcggctatggcctgccgatcggcgaggtggtgtcc
gagggcaacgtcggcctcatgcaggcggtcaagcggttcgagcccgacaagggcttccgc
ctcgccacctatgccatgtggtggatcaaggcctcgatccaggaatacatcctgcgctcc
tggtcgctggtgaagatgggcaccacggcgaaccagaagaagctgttcttcaacctgcgc
aaggccaagagctccatctcggcgctcgaggacggcgatctcaggcccgaccaggtcgag
gtcatcgccaccaagctcggcgtcgagaagcaggacgtcatcgacatgaaccgccggctc
ggcggcgacgcctcgctcaacgctcccgtccgcgaggacggcgacggcgagtggcaggac
tggctggctgacgattccgacagccaggaggccgtgctcgcccgcgaggaggagaccgac
aaccgtcggctcgccctcacccgcgccctcggcgtgctgaacgagcgtgagcgcatcatc
ttcgaggagcgccgcctcaaggacgacccgatcacgctggaggagctcgccgagcgcttc
ggcgtctcccgcgagcgggtacgccagatcgaggtccgcgccttcgagaaggtgcaggac
gccgtggtgaagtcgatccgcgagatcgagcgccccgccgcccagccggcgcagatcgcc
gcccgctga

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