Pediculus humanus corporis (human body louse): Phum_PHUM067610
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Entry
Phum_PHUM067610 CDS
T01223
Name
(RefSeq) pre-mRNA cleavage complex II protein Clp1, putative
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
phu
Pediculus humanus corporis (human body louse)
Pathway
phu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Phum_PHUM067610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM067610
Enzymes [BR:
phu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
Phum_PHUM067610
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
Phum_PHUM067610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
CbiA
nSTAND3
AAA_18
AAA_10
AAA_22
Motif
Other DBs
NCBI-GeneID:
8231150
NCBI-ProteinID:
XP_002423566
VectorBase:
PHUM067610
UniProt:
E0VBS2
LinkDB
All DBs
AA seq
425 aa
AA seq
DB search
MAENTESEEQVEEFVLEADSELRFEIETKNEKVAVELKAGMAELFGTELVKGKKYIFSTG
AKVAIFTWQGCTLELKGKTDVSYVARETPMVMYLNCHAALEQMRKNAETNEKKGPIAMVV
GPCDVGKSTVCRILLNYAVRMGRRPIYVDLDVGQGHISLPGTIGAMLIERPASVDGFSQQ
APLVYHFGHTAPNANLPLFNLLISKLSEVISERMQANKKANASGVVINTCGWVRGSGYKQ
ILHVAQSFEVDVILVLDQERLYNELQRDLPNFVKVVFLPKSRGVVERSQSNRAENRDSRV
NEYFYGSMSPQLFPHSFDVKLSEIQVYKIGAPSLPDSCMPLGMKPEENKTKLVQLTPGMN
LLNHILAVSFAASADEDVITTNVAGFICVTNVDLKRGVLTVLSPQPRPLPQTLLLLSDVQ
FLDSH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaataccgaaagtgaagagcaggtagaagaatttgttttagaagcagattct
gaattaagatttgaaatcgaaacgaaaaatgaaaaagttgcggttgagcttaaagctggt
atggcagaattgttcggaacggaacttgtcaaagggaaaaaatatattttttcaaccggt
gccaaagtagccatattcacatggcaaggctgcactctagaattaaaaggtaaaacggat
gtcagttacgttgcaagagaaacacccatggtaatgtatttaaattgccatgctgctctt
gaacaaatgcgtaaaaatgctgaaacgaatgaaaaaaaaggacccatcgcaatggttgtc
ggtccttgcgatgttggcaaaagtacagtttgtagaatattattaaattatgcggtaaga
atgggaagaagaccaatatatgttgatttagatgttggacagggtcacatttcattacct
ggaacaataggagcaatgttaatcgaaaggccagcatctgtcgatggattttctcaacaa
gctccattggtttatcatttcggacacacagcacccaatgctaacttaccattatttaat
ttgttaataagtaaattatctgaagttatttcggaaaggatgcaagccaataaaaaagcg
aatgcatctggtgttgtcataaatacctgcggttgggttagaggcagcggatataaacaa
atacttcatgttgctcaatcttttgaagtggatgttattttggtattagatcaggaaagg
ttatataacgaactacaaagagatttacctaattttgttaaagttgtatttttacccaag
agcagaggagttgtagaaagatctcaaagcaacagagcagaaaatcgggattcaagagtt
aatgaatatttttatggttcaatgtcgccacaattatttccacattctttcgatgttaaa
ttatcagagatacaagtttacaaaataggtgctccatcactgccagattcatgcatgcca
ttaggaatgaaacctgaagaaaacaaaacgaaattagttcaattaacacccggtatgaat
ttacttaatcacattttagctgttagttttgcagcaagcgccgacgaagatgtcatcacg
acaaacgtagccggatttatttgcgttacgaacgtcgatttaaaaagaggagttttaacc
gtgttgagcccccaacctcgaccacttcctcaaactttactcttactatcggacgtacaa
tttttagacagtcactga
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