Pediculus humanus corporis (human body louse): Phum_PHUM074520
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Entry
Phum_PHUM074520 CDS
T01223
Name
(RefSeq) CCR4-NOT transcription complex subunit, putative
KO
K19612
2',5'-phosphodiesterase [EC:
3.1.13.4
3.1.4.-]
Organism
phu
Pediculus humanus corporis (human body louse)
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM074520
03029 Mitochondrial biogenesis [BR:
phu03029
]
Phum_PHUM074520
Enzymes [BR:
phu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
Phum_PHUM074520
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
Phum_PHUM074520
Mitochondrial biogenesis [BR:
phu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Phum_PHUM074520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
PDE12-like_N
Motif
Other DBs
NCBI-GeneID:
8231270
NCBI-ProteinID:
XP_002423609
VectorBase:
PHUM074520
UniProt:
E0VBW5
LinkDB
All DBs
AA seq
559 aa
AA seq
DB search
MKSIFFHLENPDKVQIQLFLNNDVPKITKVISFQRNLSENLGKFLIKLNGRVEDLVKKSS
KSGKKDKTNDDNNSINVIGKFFSNDEPISDELTFQNMFEEHEKNKITLNILGVDYNAFIN
WPYVSVIKPPKEIKVGCPTSPSEIVILSGDLKHSNFKWYKKLPHHRDWIYCEDNFFYTPK
EEDIGYNIKLVCIPKSENKIGSEYHVDCPKLVTPFNETELIKKRHEFTKSETKPEKIRVV
CYNILADTYTNTKEAKNSIFAYCNSDALDLENRKRLLLTELTGYNSDIICLQEVDKKLYD
TVFLPFCNFKNFNSVYNKKEGFREGCAMFYKKSKFEFIDHVQYLYAVELKNNKIFKNLKE
IIYNNNKLVTRLNSLQTLLQVVVLKSLTSANDYLVVGNTHLYFHPDADHIRLLQGIMGFD
LLNNTANELKRKLPDINVSIIFCGDFNSTPDCGVYKYITEGYIEGSEIDWKSNLEEAVDG
YSANHSVKMISACGTPEFTNYTKGFKACLDYIYFQNNRLELESFVPFPSLDDLSREVALP
STFFPSDHVALIADLKWKC
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaattttctttcacttggaaaacccggataaagttcaaattcaattattttta
aataacgacgttcctaaaatcactaaagtaatatcatttcaaagaaacttatcggaaaat
cttggaaagtttttaattaaattaaacggacgagtggaagatttagtcaaaaagagtagt
aaatcgggaaagaaagataaaactaatgatgataataatagtattaatgtaattgggaaa
tttttttcaaacgatgaaccaatctcagatgaattgacttttcaaaatatgtttgaagaa
catgaaaaaaacaaaattacattaaatatattgggtgttgattataacgcttttattaat
tggccgtatgtatcagtcataaaaccacctaaagaaattaaagtgggatgtccaacttct
ccttctgaaattgttattttaagcggtgatttgaaacattcaaattttaaatggtataaa
aaattaccacaccacagagattggatttactgtgaagacaattttttttatactccaaag
gaagaagacataggttataatataaaacttgtctgcattcctaaaagtgaaaacaaaata
ggatcggaatatcatgttgattgtccaaaacttgtgacaccattcaatgaaacagagtta
attaaaaaaaggcatgaatttaccaaaagtgaaacgaaacctgaaaaaattcgtgttgtg
tgttataacattttagcagatacatatactaatacaaaagaagccaaaaactctattttc
gcttattgtaattctgatgcccttgatttagaaaacaggaaaagattattattaacagaa
ttaactgggtataattctgatataatttgtttacaagaagttgataaaaaattatatgac
acagtatttttaccattttgtaattttaaaaatttcaatagtgtttataataaaaaagaa
ggcttcagggaaggatgtgctatgttttataaaaaatcaaaatttgaatttattgatcat
gtgcaatatttatatgctgtcgaacttaaaaataataagatttttaaaaatttgaaagaa
ataatttataataataacaaattggttacaagattaaatagtttacaaactttacttcaa
gtggttgttttaaaatctttaacatctgcaaatgattatttagttgttggtaatacacat
ttatattttcatcctgatgctgatcacattcgtttattgcaaggaatcatgggttttgac
ctacttaataatacagcaaatgaattaaaaagaaaattgcctgacataaatgtttcgata
atattttgtggagattttaacagtactccagattgtggagtttataaatatataactgaa
ggatatattgaaggctcagaaattgactggaaaagtaatttagaagaagcagttgatgga
tattcagctaatcattcggtgaaaatgataagtgcttgtggtacaccagagtttactaat
tacactaaaggatttaaagcatgcttagattatatttattttcaaaacaacagattagaa
ttggagagttttgttccttttccaagtctggatgatttaagtagggaagtagctttacca
agcacattttttccatcagaccatgtagcattgattgctgatcttaaatggaaatgctaa
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