Pediculus humanus corporis (human body louse): Phum_PHUM168090
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Entry
Phum_PHUM168090 CDS
T01223
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
phu
Pediculus humanus corporis (human body louse)
Brite
KEGG Orthology (KO) [BR:
phu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phu03019
]
Phum_PHUM168090
03041 Spliceosome [BR:
phu03041
]
Phum_PHUM168090
03036 Chromosome and associated proteins [BR:
phu03036
]
Phum_PHUM168090
Enzymes [BR:
phu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Phum_PHUM168090
Messenger RNA biogenesis [BR:
phu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
Phum_PHUM168090
mRNA cycle factors
Common to processing body (P body) and stress granule
Phum_PHUM168090
Spliceosome [BR:
phu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Phum_PHUM168090
Chromosome and associated proteins [BR:
phu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Phum_PHUM168090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
8236650
NCBI-ProteinID:
XP_002424996
VectorBase:
PHUM168090
UniProt:
E0VFV2
LinkDB
All DBs
AA seq
684 aa
AA seq
DB search
MSNVPNQNGSGLEQQLAGLDLQSGQSQKNSALVGRYIPPHLRKKQLSGSGEDNHYSERDS
SSANRDYNRHENRGGGSSGYRGGQGSGGRVSSSSDYSNFSRNNKRYDDRSCANGGDSYDR
DRRSYGTLFIFRDAWRSNSGNRGGNNSGNRWQDRDDGPPVRNDRWQEPVRDDRRYSDRRG
ERGGGSSRWKENSESGWTVPTARDERLEIELFGTGNTGINFSKYEDIPVDATGENVPPHI
ESFSEIKMTEIISNNIMLARYDKPTPVQKYAIPIIMSRRDLMACAQTGSGKTAAFLVPIL
NQMYQRGPQNNRPYSHRKQYPMGLVLAPTRELATQIYDEARKFSYRSRLRPCVVYGGSYL
QDQFRELEKGCHLLVATPGRLADMLDRDKIGLENCKFLVLDEADRMLDMGFEPQIRRIVE
KDMPRTGERQTLMFSATFPDVIQADKRSFLLDLLNATRYKNGTESLTLVFVETRKGADCL
EEYLHYQGYPVSCIHGERSQREREDALRRFRSGETPILVATAVAARGLDISHVTHVINFD
LPSDIEEYVHRIGRTGRMGNLGVATSFFNEKNRNIVRDLVELLTETNQDLPKWLEAFASD
MNAPQTSRRGGGSKTRFGGGFGARDYRQQSNSRSGGNQNSRSGYNSYGSGNPSHQGFYMN
HESGYGGSYSTPNNSSNGPDWWGS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtacccaaccaaaatggatcaggtctagagcagcaacttgctggtctggac
ttgcagagcggccaaagtcaaaaaaatagtgcattagttggccgttacattcctccacat
ttgcgtaaaaagcaattaagtggttctggcgaggacaatcactattctgaacgtgattct
tcctcagcaaatcgggattataatcgacacgagaacagaggcggaggaagttcaggatat
cgtggtggacaaggtagtggtggacgcgttagttcaagctcagattacagtaatttttca
agaaataataaacgatacgatgatagatcgtgcgccaatggaggtgatagttacgacaga
gacagacgttcatacggaactttatttatatttagggatgcttggcgaagcaatagtggc
aacagaggaggtaataatagtggaaacagatggcaagaccgtgatgatggaccccctgtt
agaaatgatcgctggcaggaaccggttcgtgacgaccgcaggtatagtgatcgcagagga
gaacgaggaggaggatcatcaagatggaaagaaaattctgaatcaggctggaccgtccca
acggcaagggatgagcgccttgaaatcgaattgtttgggacgggcaatacaggtattaac
ttcagcaaatacgaagatatacccgtggacgcgactggcgaaaacgtcccacctcatatt
gaatcattcagtgagatcaagatgacagaaataatttcaaataatataatgttagctcgt
tacgacaaacccactcccgttcaaaaatatgcaataccaataataatgagtcggagagat
cttatggcctgcgctcaaaccggatccggaaaaactgcggcttttctcgttcctattttg
aaccaaatgtatcagcgcggtcctcaaaataatcggccttacagccatcgaaaacagtat
cccatgggactcgtacttgctccgactcgagagctcgctactcaaatttatgatgaagct
cgtaaattttcgtaccgctccagacttcgaccttgcgtcgtgtacggtggttcttatctt
caagatcaatttcgcgaattggagaaaggatgccatcttttagttgcaacgcccggtcga
ttagcagatatgttggatagagacaaaattggactcgaaaattgcaagtttctggtgctc
gacgaggctgaccgcatgctggacatgggtttcgagcctcaaataagaagaattgttgaa
aaagatatgccgagaacaggagaaaggcaaacattgatgttttctgctactttccctgat
gttatacaggcggataaacgatctttcttattagacctcctaaatgctacgcgttataaa
aatggaaccgaatccttgacattggtttttgttgaaactagaaaaggagctgattgtttg
gaagaatatcttcattatcagggctatccggtgagttgtattcacggtgaaaggtcacaa
cgtgaaagagaagatgctttaagaagatttcgaagcggagaaactcccatacttgtggct
acagcagttgcggcaagaggtctcgacatctctcacgttactcacgtaattaatttcgat
ttgccatcggatattgaagaatacgttcacagaatcgggagaaccggtcgtatgggaaat
ttgggtgtagccacgtcttttttcaatgaaaaaaatcgaaacattgtacgggatttagtt
gaattgttaacggaaacaaatcaggaccttccgaaatggttggaagcgttcgcatccgac
atgaacgctccgcagacatccaggagaggaggaggttcgaaaactcgtttcggaggaggt
ttcggagccagagactatcgtcaacaatctaattcacgttctggtggaaaccaaaactca
agaagtggttataattcgtatggaagtggtaatccttctcaccaaggattttacatgaat
cacgaaagtggctatggaggatcatattcgactccgaacaatagtagcaatggacctgat
tggtggggttcctga
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