Peptacetobacter hiranonis: KGNDJEFE_01479
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Entry
KGNDJEFE_01479 CDS
T06633
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
phx
Peptacetobacter hiranonis
Pathway
phx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGNDJEFE_01479 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phx03019
]
KGNDJEFE_01479 (pnp)
03016 Transfer RNA biogenesis [BR:
phx03016
]
KGNDJEFE_01479 (pnp)
Enzymes [BR:
phx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KGNDJEFE_01479 (pnp)
Messenger RNA biogenesis [BR:
phx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KGNDJEFE_01479 (pnp)
Transfer RNA biogenesis [BR:
phx03016
]
Prokaryotic type
tRNA degradation factors
KGNDJEFE_01479 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
Med29
DUF1773
TrkA_C
Flavi_NS4B
DUF2459
Motif
Other DBs
NCBI-ProteinID:
QEK20992
LinkDB
All DBs
Position
complement(1548103..1550190)
Genome browser
AA seq
695 aa
AA seq
DB search
MVEHKIYTTEFAGRELSVEVGKICEMTNGNCIVKYGDSVVMVNTTKSAEPRDGIDFFPLS
VDYEEKLYSVGKIPGGFLKREGKPSEKAILTSRLIDRPIRPLFPKGFRNDVQVVATVLSV
DQDCTPDIVAMIGSSVALSISDIPFNGPTGSVCIGLVDGEFVVNPNAEQREKSEMHLVVS
GTKDAIMMVEAGAQEVSEDTMLKAILFAHEHIKKIVEFIEEIVAGSGKEKEEVKLYHADE
DIEAQVKEFASAKMREAVQTVEKMERMENMDKVKEETFAYFEEKLENFEEVAGDIEEVLQ
AIIKDEVRSLITDEEVRPDNRKYNEIRPIWCETGMIPRTHGSAIFTRGQTQVMNIATLGA
LGDVQKLDGLDEEENKRYMHHYNFPAYSVGEARPSRGPGRREIGHGALAERALLPVIPSQ
EDFPYAIRLVSEVLSSNGSTSQASVCASTLSLLDAGVPIKDMVAGIAMGLIKHHDKVVVL
SDIQGMEDHLGDMDFKVAGTEHGITAIQMDIKIDGIDEDILRRALAQAREGRMHILGEMR
KVISEPRPELSPYAPKIERMNINPDKIKDVIGPGGKVITKIIDETGVKIDIEQTGEVFIA
GTDKAMIDRAKELIGNIVAEAEVGKVYRGKVTRIMNFGAFMEILPGKEGLLHVSQISKER
VNNVEDVLNIGDELEVKVTEIDEKGRINLSRKVLL
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggttgaacataagatatatactacagaatttgctggtagagagctttctgtagaagta
ggaaaaatatgtgaaatgactaatggtaactgtatagtaaaatacggtgacagtgtagtt
atggtaaacacaacaaaatcagcagaaccaagagatggaatagatttcttccctctaagt
gttgattacgaagaaaaattatattcagtaggtaaaatacctggtggattcttaaaaaga
gaaggaaaaccttcagaaaaagcgatattaacatcaagattaatagatagaccaataaga
cctttattcccgaaaggattcagaaatgatgttcaggttgttgcaactgttctttcagta
gaccaggattgtactcctgatatagtagctatgataggttcatcagttgcattatcaata
tctgacatacctttcaatggcccaacaggttcagtttgcataggtttagttgacggagaa
ttcgttgttaaccctaacgctgaacagagagaaaaaagtgaaatgcacttagtagtatct
ggaacaaaagacgctataatgatggttgaagcaggtgctcaggaagtatctgaagatact
atgttaaaagctatattattcgcacatgaacacatcaaaaaaatagttgagtttatagaa
gaaatagtagctggttcaggaaaagaaaaagaagaagtaaaattataccatgctgatgaa
gatatagaagctcaggtaaaagaatttgcttcagcaaaaatgagagaagccgttcagact
gttgaaaaaatggaaagaatggaaaatatggataaagttaaagaagaaacttttgcttac
tttgaagaaaaattagaaaactttgaagaagtagctggagatatagaagaagttcttcag
gctataataaaagacgaagttagatctttaataactgatgaagaagtaagaccagacaac
agaaaatacaatgaaataagacctatatggtgtgaaactggtatgataccaagaactcat
ggttctgcaatattcacaagaggtcagactcaggtaatgaacatagctacattaggagct
ttaggcgatgttcagaaacttgatggattagatgaagaagaaaacaaaagatatatgcac
cactacaacttcccagcttactcagtaggtgaagctagaccttcaagaggaccaggaaga
agagaaataggacatggggcacttgctgaaagagcattacttccagtaataccatctcag
gaagatttcccttatgcaataagattagtatctgaagtactaagctcaaatggatcaact
tctcaggcgagtgtttgtgcatctacattatcattattagatgctggtgttccaataaaa
gatatggtagctggtatagccatgggtctaataaaacaccacgataaagtagttgtactt
tctgatatacagggaatggaagaccacttaggagatatggacttcaaagttgcaggtact
gaacacggtataacagctatacagatggatataaaaatagacggtatagatgaagatata
ctaagaagagctcttgcacaggctagagaaggtagaatgcacatacttggagaaatgaga
aaagttatatctgaaccaagaccagagctttctccatacgctccaaaaatagaaagaatg
aacataaatccagataagataaaagatgtaataggacctggtggaaaagttataactaag
ataatagacgaaactggtgttaaaatagacatagaacagactggtgaagtattcatagct
ggtactgacaaagctatgatagacagagctaaagaacttatcggaaatatagttgctgaa
gcagaagttggtaaagtatacagaggtaaagtaactagaataatgaacttcggtgctttc
atggaaatacttccaggtaaagaaggacttcttcatgtttctcagatatctaaagaaaga
gtaaacaatgtagaagatgttctaaacataggcgacgaattagaagttaaagtaactgaa
atagatgaaaaaggaagaataaacctttctagaaaagttctattataa
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