Pseudomonas hygromyciniae: JTY93_14290
Help
Entry
JTY93_14290 CDS
T09404
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
phyg
Pseudomonas hygromyciniae
Pathway
phyg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
phyg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JTY93_14290 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phyg02044
]
JTY93_14290 (tssC)
Secretion system [BR:
phyg02044
]
Type VI secretion system
Imp/Vas secretion system core components
JTY93_14290 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QSB37547
LinkDB
All DBs
Position
complement(3268744..3270219)
Genome browser
AA seq
491 aa
AA seq
DB search
MTPSPNAHAAPLDTGYSILDDIIAQTRLTADDETYDIAKRGVAAFIEELVKPQNRGEPVK
KQLVDRMIAEIDTKLSRQMDEILHHPEFQALESAWRGLQLLVDRTDFRENIKIELLNVSR
QDLLDDFEDSPEVVQSGLYKHTYSAEYGQFGGQPVGAIIANYFLSPSAPDVRLMQYVSSV
ACMAHAPFIAAAGPGFFGLESFTGLPDLKDLQDHFEGPQFAKWQSFRQSEDARYVALTVP
RFLLRTPYDPVDSPVKTFAYNEHVVSSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGTVEDLPLHHFQSMGEIETKIPTEVLVSDRREYELAQEGFIALTMRKGSDNAAFFSA
SSVQKPKYFGISAEGKAAELNYRLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAARVVVSDVEGEPGWYRINLSVRPHFKYMGADF
TLFLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgacccccagccctaacgcccatgcggcccctttagataccggatacagcattctcgat
gacatcatcgcccagacccgcctcacagccgatgatgaaacctacgacatcgccaagcgc
ggcgtcgcggcgtttatcgaggagttggtcaagccacagaaccgtggggagccggtcaag
aagcaactggtagaccggatgattgccgagatcgacaccaagctcagccggcaaatggat
gaaatcctccaccaccccgagttccaggcgctggagtcggcctggcgcggcttgcagttg
ctggtggatcgcaccgacttccgggaaaacatcaagattgagctgctcaacgtctcgcgc
caagacttgctggatgatttcgaagactcaccggaggttgttcagtcggggctctacaag
catacctacagcgccgaatacggtcagttcggtgggcaacccgtgggtgcgatcatcgcc
aactacttcctttcacccagcgcgcccgacgtcaggctgatgcagtatgtttccagcgtc
gcttgcatggcccatgcgccattcatagccgccgccgggcctggttttttcggcctggag
agctttaccggcctgccagacctgaaggacctgcaggaccacttcgaagggccacaattc
gccaagtggcagagcttccgccagagcgaggatgcccgttacgtcgccttgacggtgcca
cgttttctcctgcgaacgccctacgacccggtggattctccggtcaagaccttcgcctat
aacgaacatgtcgtcagcagccatgagcattatctctggggcaatactgcctatgccttc
gccacgcgcttgactgacagctttgcccgtttccgctggtgccccaacatcatcggcccg
caaagcgggggcacggtggaagacctgccgctgcatcatttccagagcatgggcgaaatc
gaaaccaagattcctacagaagtactggtctccgaccgtcgcgaatacgagctggcgcag
gagggcttcattgccctgacgatgcgcaagggcagcgacaacgccgcattcttttccgcc
agttccgtgcagaagcccaagtacttcgggatcagtgccgagggcaaggcagccgaactg
aactacaggctcggcacccaactgccgtacatgatgatcgtcaaccgcctggcgcactat
ttgaaagtgctgcaacgcgagcagttgggttcgtggaaggaacgtaccgacctggaattg
gaactcaacaagtggattcgccagtacgtggcggaccaggaaaaccccagcgccgaggtc
cgggggcgccgtccattgcgggcggcgcgggttgttgtcagtgatgtggagggcgagcca
ggctggtatcgcatcaacctcagcgtacgcccgcacttcaagtacatgggggcggatttc
accctgtttctggttggcaagctcgataaagaatga
DBGET
integrated database retrieval system
