Pangasianodon hypophthalmus (striped catfish): 113523661
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Entry
113523661 CDS
T05759
Symbol
utp6
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113523661 (utp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phyp03009
]
113523661 (utp6)
Ribosome biogenesis [BR:
phyp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113523661 (utp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
113523661
NCBI-ProteinID:
XP_026765451
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MADLVQQRIEDRIPALEQLERVGLFTKKEVKSMLKRSTALEYKLHRSVQSKDDYITYIQY
EVNVLELIKKRRARIGYQFKREDIEFPIIQRINSVFRRATSKWQEDVQLWLSQVAFCKKW
GTKGQLSKVFSSMLAIHPDKPNLWIMAAKCEMEDRNSSESARHLFLRALRFHPESKKVYQ
EYFRMELLHAEKLRKQQEELQRAKIDMGEYEFSPEILSGRLAEVVYKDATQKIKGAEFML
SLLQIAAIFDFTKELQDSILQDLQSQHTDDSVTWDFMARRELEVGGASEPHSAQSRAADI
MSREERCGAVYEEGLKNLDTEPMWTCYVTFCLDRFKRKTNVTELKEKRRERLLGVLQRAH
DASLLQEAFYRTWLEVLISSEKTEAAVQVAVAAAKRFSQSVETWTLSLQALVRLESVEAG
PLFQEALKLVNPKESLPLWKLRAEWSVASQPPDETEALFQKAMLSPVPAVSAALKEIYLQ
WAYRTGGYKKARKLFTSLHEHRPFSKTFFTTMVQIEKEQEKPKMSHLRDYYERALREFGS
SDDDLWMDYIKEELGIHGNAENCGKLHWRAMKSLTGESVERFTTQYTLLQTGHI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttggtgcagcagcggattgaggaccggattccggctctggagcagctggag
agagtcggactgttcaccaagaaagaagtgaagtcgatgctgaaaagatccacagctctg
gaatataaactccacagatccgtgcagagtaaagatgattacattacctacattcagtat
gaagtaaacgtcctggagctcatcaagaagagaagagccagaatcggctaccagttcaaa
agggaggacatcgagttccccatcatccagagaatcaacagcgtgttcaggagggcgacg
tcaaagtggcaggaggatgtgcagctgtggctctctcaggtcgccttctgcaagaaatgg
gggacgaagggtcaactcagcaaggtcttctcctccatgctggccatccaccccgacaaa
cccaatttatggatcatggcagccaagtgtgagatggaggacaggaattcatctgaaagc
gctcgccacctctttctcagagcgcttcgcttccatccggagagcaagaaggtttaccag
gagtatttccggatggagctgttgcatgccgagaaactgcggaaacaacaggaggaactg
caacgtgccaaaatcgacatgggtgagtacgagttttctccagagatcctgagcggcaga
ctggcggaagtcgtctacaaagacgctacgcagaaaattaaaggggcggagtttatgctc
tcactgctacagatcgctgccatttttgacttcaccaaggagcttcaggactccatcctc
caggatctgcagagtcagcacaccgacgactccgtgacctgggacttcatggctcggcgg
gagctggaggtgggcggggcttctgaaccgcactcggcgcagagtcgggccgctgacatc
atgagcagagaggagcgctgcggcgccgtgtacgaggagggactcaaaaacctcgacaca
gaacccatgtggacgtgttatgtgacgttctgtttggacagatttaagaggaaaacaaac
gtcacggagctgaaggaaaagagaagagagcggctgctcggtgtccttcagagagctcac
gatgcctcactgctgcaggaggctttctacaggacctggctggaggtcttgatctcctcc
gagaaaacagaagccgccgttcaggtcgccgtagcagccgctaaacgcttcagccaatcg
gtggagacgtggacgttgagcttgcaggcgttggtgcgtttagagagcgtggaggcgggg
cctctgttccaggaagcgctgaagctcgtgaatcccaaggagagtttgccgctgtggaag
cttcgtgccgagtggagcgtcgcgtctcagcctccggacgagacagaagctctgtttcag
aaagcgatgttatctccggtcccggccgtttccgccgcgctgaaggaaatctacctgcag
tgggcttacagaaccggcggctacaaaaaagctaggaaacttttcaccagcctgcacgag
caccgacctttctccaaaaccttcttcaccacgatggttcagatcgagaaagaacaagag
aagccgaagatgagtcacctgagggattactacgagcgagcgctgcgcgagttcggctcc
tccgacgacgatctgtggatggattacatcaaagaggagctgggtatccatggcaacgct
gagaattgtgggaaactccactggagggccatgaagagcctgaccggagagagtgtggag
cgcttcacgacgcaatacacactgctgcagacgggccacatctag
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