Pangasianodon hypophthalmus (striped catfish): 113529571
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Entry
113529571 CDS
T05759
Symbol
csf1r
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor isoform X1
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04010
MAPK signaling pathway
phyp04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113529571 (csf1r)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
113529571 (csf1r)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
phyp01001
]
113529571 (csf1r)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
phyp04090
]
113529571 (csf1r)
Enzymes [BR:
phyp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
113529571 (csf1r)
Protein kinases [BR:
phyp01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
113529571 (csf1r)
CD molecules [BR:
phyp04090
]
Proteins
113529571 (csf1r)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
VEGFR-1-like_Ig-like
C2-set_2
Motif
Other DBs
NCBI-GeneID:
113529571
NCBI-ProteinID:
XP_026774637
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MILFTFIAGLLSCQVQAWSQPRIRVNGEDPVESNAVIDTGSRLVLTCVGDAPVTIVPRLA
KHKSYSKANGNSSTFTVQKATYRYTGTYKCVYTGIDSSIFSSVHIFVRDSRFLFETPLNP
SIIKKEGEDALIPCLLTDPAATDVRLFRENRSPLPPDMNTTYDPKKGMLIQNLQLWFSSK
YVCSGRIGGVEKMSPAFTLQVTNVARFPAYVFLQSNEYIRLAGERLEITCSSSNPNFNYN
LTWKHSSRLQLPNPEIKPTYTNNSVKIQSTLILPAVTMSDSGNITCIGTNEAGVNSSTAS
LLVVDEPYIKLSPRLIHKGLSINVHEGQDVELGVAIEAYPKITFEHWEGPTLLHNSQHEI
RFFSYNNRYEAVLLLKRLNSKEQGRYTFYANSSKAHASITFSIRVNEKPVIVDKRRNESS
LICIASGYPAPRILWFQCQGTRPTCTENSTDMEARQLITAEAVEVKNDEFGSVEVESLIT
ITPSHQKMTVECVAQNLFGQDSNAFPIDQTEKLFTATLTGAISVMVFLLLLLLILMYKYK
QKPKYEIRWKIIEATDGNSYTFIDPTQLPYNEKWEFPRDKLKLGKILGSGAFGKVVEATA
YGLGKEDNVTRVAVKMLKASAHSDEKEALMSELKILSHLGQHKNIVNLLGACTHGGPVLV
ITEYCCHGDLLNFLRNKAQTFLNCVVSIPEERSNYKNVTVDKMFFRSDSGISSICSDSYL
DMKPLAPRSQPSRLPSCDQEGDPLDVDDLLRFSYQVAQGLEFLAAKNCIHRDVAARNVLL
TDGGVAKICDFGLARDIMKDSNYVVKGNARLPVKWMAPESIFECVYTVQSDVWSYGILLW
EIFSLGKSPYPNILVDSKFYKMIKCGYQMSRPDFALPEMYTIMKMCWNLEPTERPNFSKI
VQLIERLLGETPDQTPYHNVQTEELDEEQLEACDTTKSDEESCEQEEDEQPLMKANNYQF
C
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcttcacctttattgcgggactgctgtcctgtcaggtacaagcttggtctcaa
cctcggataagggtaaacggagaagatccagttgaatccaatgcggtcattgatactggt
tcacgtcttgttctgacctgtgtgggtgatgccccggtgactattgtacctcggctagct
aaacataaatcatacagcaaggctaacggaaacagcagcacctttactgtgcaaaaagct
acctacaggtacacaggcacttataagtgtgtgtacactggcatagattcctccatcttc
tcatctgtgcacatattcgtaagagattcaaggtttctctttgaaaccccactgaatcct
tccattatcaagaaggaaggagaggatgcccttattccctgccttcttactgaccccgct
gccactgatgtccggctctttagggagaatcggtctccactaccccctgacatgaacaca
acctacgaccccaagaaagggatgctgattcaaaaccttcagctttggttcagttcaaag
tatgtctgcagtggcaggataggaggagtggagaaaatgtccccagccttcactttacaa
gtcaccaatgtagctcgttttccagcctacgtgttcctgcaaagtaatgagtatattcga
ctagctggggagagactagagattacctgttcctccagcaaccccaacttcaactacaac
ctcacatggaagcactcatcacgtttgcaattaccaaacccagagatcaagcccacatat
acaaataatagtgtgaaaatccagagtacgctgatcctgcctgcagttaccatgtctgac
tcgggtaatatcacctgtattggaactaacgaggctggagtcaacagctccaccgcaagc
ctgctggttgtggatgaaccctatattaagctgtccccccgtctgatccataagggtttg
tccattaatgtccatgagggccaggatgtagagctaggggtggctatagaggcttaccca
aaaatcacattcgagcactgggagggaccaacgcttctccacaactcacaacatgaaatc
aggttcttcagctataataacaggtatgaggcagtgctgcttctgaagagactgaactcc
aaggaacagggcagatacaccttctatgccaacagcagcaaggctcatgcctccataaca
tttagcattcgtgttaatgagaagccagttattgtggataaaagaaggaatgagagctcc
ctaatatgcatagcgtctggctacccagctcccagaatcctctggttccagtgtcaagga
accaggccaacgtgtacagagaattccacagacatggaggctcgccagttgatcacagct
gaggcagtggaggtgaagaatgatgaatttggatcagtggaagtggaaagtcttataacc
atcacaccatcccatcagaaaatgactgtagagtgtgtggcacaaaatctgtttgggcaa
gacagcaatgcattccctatagaccagactgagaaactgtttactgcaacattgactgga
gcaataagtgtgatggttttcctccttctactcctcctcatcctcatgtacaagtataaa
cagaaacccaaatatgagatacggtggaagattattgaagccacagacgggaacagctac
acatttatcgatcccactcaacttccttataatgaaaaatgggaatttccaagagacaag
cttaaattagggaagatcctgggttcaggggcgttcgggaaagtggtggaggctacagcg
tatgggctggggaaggaggacaatgtgacccgtgtggctgtgaaaatgctcaaagctagc
gcccattcagatgagaaggaggctctgatgtccgaactgaagattctgagtcatctcgga
caacacaagaatattgtcaacctgctaggggcctgtacacatggaggtcctgtgctggtc
atcactgagtactgctgccatggcgatcttctgaacttcctgcgtaataaagcacagacc
ttcttgaactgtgtggtttcaatcccagaggagagaagcaactataaaaatgtcactgta
gacaagatgttttttagaagtgacagtgggatttccagcatttgttcagacagttacctg
gacatgaagcctctagcacccagatctcagccttcacgccttccttcctgcgatcaagaa
ggagacccattggatgtggatgacctgctcagattctcctaccaggttgctcagggactc
gagttcctcgccgctaaaaactgtattcacagagacgtcgcagccaggaatgttcttctg
acagatgggggtgtggctaaaatctgcgacttcggactggcccgtgatatcatgaaagat
tctaactatgtggtcaaaggaaacgctcgtttgccagtgaagtggatggctccagagagt
atcttcgagtgtgtgtatacagtacagagtgatgtttggtcatatggtattctgctgtgg
gagatcttctctctgggtaaaagcccatatccaaacatcctggtggactccaagttctat
aagatgataaagtgtggctatcagatgtcccgtcctgactttgccctacctgagatgtac
accatcatgaaaatgtgctggaaccttgaacccacagagcggccgaatttcagcaagatc
gttcagctcatcgagaggctgctgggagaaacaccagatcagactccgtatcataacgtg
cagacagaagaactggacgaggagcagctggaggcctgtgataccaccaaaagtgatgaa
gaatcatgtgagcaggaggaagatgagcagcccctgatgaaggccaacaactatcagttc
tgctaa
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integrated database retrieval system
