Pangasianodon hypophthalmus (striped catfish): 113530758
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Entry
113530758 CDS
T05759
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04510
Focal adhesion
phyp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113530758
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113530758
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Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Alanine_zipper
FlaC_arch
ATG16
Laminin_II
Motif
Other DBs
NCBI-GeneID:
113530758
NCBI-ProteinID:
XP_026776853
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MASCLVLLILALHTLAQELPSGRHGCTDGSCYPATGNLLIGRAVNLTATSTCGLETPEQY
CIVSHLQQSDKCFTCDSRRPYDFHHHKSSHRVENVIYLRDSRGDLTWWQSVNGEESVSIR
LNLETEFHFTHLIMKFKTFRPAGMLIERSVDFGRSWRPYRYFAYNCTRTFPGVRTRPLRF
IDDVICEERYSDIEPSTEGEVIFKVLDPAISVSNPYSPNIQDLLRITNLRINFTKLHTLG
DNLLDRRPDVLQKYYYSVYELVVRGSCFCYGHASECTPVPGVHTQDNGMIHGRCVCKHNT
VGLNCERCRDFYHDLPWRPAEANNPHACRECNCNGHSNKCHFDMAVYLATGNVSGGVCDD
CLHNTMGRNCETCKPFFYQDPARDIRDPYVCVRCDCDPVGSLDGGKCDSHTDIYLGMIGG
QCRCKPNVQGQRCDYCKEGHYGLSQNDPLGCQSCNCDPRGTNMMGPLCNYISGECSCKRY
VTGRYCNQCISEYWGLSNDHAGCRPCDCDFGGSYSKRCRMEDGQCDCRPHLIGHQCSDVE
PGYFCAALDYYTYEAERAVGHSPDSADLPGKPRPLVINDCTQHFNNQLRRHRRHQHITPQ
QRAALRRIRQLQQTPDVTIAGRERYTDQMVTWTGPGFARVKDGAGLVFTIEDISYAMEYD
IMIRYEPESTEDWEAIVSVTSVSLSTSTRCGNLLPTEQLYTVTLLHSKRHVLMPQPFCFE
PSNRYVVAIRFQRHAVSQRHLNAHILADSLVLIPRYEELPGFTGNDPLAVQRREDMVRYM
CLDSFMTTPMPNLAEICIKLICSISSVMHTGAISCHCDAQGSLSVECKKIGGQCQCKPNV
IGRHCNQCAPRTYGFGPYGCTACECHRDGSDAQQCDPVTGRCPCRPGAFGRQCSECQPGH
WGFPDCRPCQCNGHSETCDPHTGTCLHCRDNTAGHLCERCTNGYYGDPVLGSGEHCHPCP
CPGNPGSGHSNADSCHMQHSSNRIMCHCKPGYTGHRCDRCAPGYYGHPEQKDGECRPCEC
NGNIVAEDPDSCDPHTGQCLKCLYNTDGPSCSECKPGYFGNALARDCRRCTCMRMGTDQE
YCSDEVCYCDKQTGACPCRPNIVGNNCDQCAANHWNLGMDDGCEACECHPQNSFSSHCNL
ISGQCHCRPGFGGKQCTECELFSWGDPAVRCNECDCHRQGSVTEQCDRITGACECKEWAV
GQHCNECARGFTGGFPKCVPCHPCFQLWDDIVCQLKHDMDRIRFIITKILEMGEVPGVGD
TRIHELEQKLAEIRKLLQDGEGDRIYQQIIQAIDDLRAEVAVTDGRLMGVERELNVTTEH
NNILKHNLTSLEREFWDLNITLFQWRRELENSISSGIIDLLNKVRKYYQESLDAEQKCNA
SVFGTHSPVEQSRHTRNITKALLDQRKGQFMRNLTAQKKSLSELKKKEEDMDKKVHHLSQ
KVCGSSGNASADGSCPDSPCGGVGCKDSNDSLVCGGPHCNGTVGESIRALEKASDVSKNL
TAVSEDLMNMAKKLQDIATLTENVKAQAMNTLDKARKKKELFETSNNKLKDFIQKIRDFL
TEEGADPESIEKVARQVLAITLPVNRTVVDSIILQLKDRIANLTDMDGVFNYSTEQLAKA
KELLDRATNEQEKAEKITDVIKKTKEAMNTTQEAIEKARTVIEEALKNLNSTQNVTAMVE
DKLSNLEASLMDMMMRLANLSQEVDFLKNKTEQNRQQAKEAKELSDNATQAASELKKDLS
HVETRYKELKDKIDSLGGAAVGNFTQKALDMKNEAEDLLRKANKDMETLKKLERKLQKNE
QRMQQQRDELAELESNVTDIRNSIREKVNFYNTCQ
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggccagttgcctggttctcctcattctagctctccatactttggcacaggagctgcca
tcaggcagacatggctgcacagatggaagctgttatccagctacagggaacctcctcatc
gggcgagctgttaacctgactgccacctccacctgcggcttggaaacacctgagcaatac
tgcattgttagccacctgcagcagtcagataagtgcttcacatgtgattctcgaagaccc
tatgacttccaccatcacaaaagcagccatcgcgtggagaacgtcatctacctgagagat
agcagaggagaccttacatggtggcaatctgttaacggagaggagagtgttagcatcaga
cttaatctggagacagagttccacttcactcacctcatcatgaagtttaagacattcagg
cctgcaggcatgttgatcgagcgctctgtggatttcgggcgatcatggaggccgtaccgc
tattttgcctacaactgcaccaggacgtttcctggagtgcgtacccggcctctgcggttc
attgatgatgtgatctgcgaggagcgctattctgacatcgagccatccacagaaggagag
gtcattttcaaagtgcttgatcctgcaatctctgtcagtaatccttacagtcctaatatt
caagacctgctacgaatcactaacctgaggattaacttcaccaaactccacactctgggt
gataacctgctggatcgtcgccctgatgtgctgcagaagtattattattcggtgtatgag
ctggtggtgcgcggcagctgcttctgctatggccatgcctctgagtgcaccccagttcca
ggagttcacacccaggacaatggcatgattcacgggcgttgtgtgtgtaagcataacaca
gtgggcctgaactgtgagcgctgcagagatttctatcatgatctgccctggagaccagcc
gaggcaaataacccacacgcttgcagagagtgcaactgtaatggccactccaacaaatgt
cattttgatatggcggtgtatctggccacggggaacgtcagtggaggtgtatgtgatgac
tgccttcacaacaccatgggccgcaactgtgaaacctgtaaacccttcttctaccaggac
ccagccagagatatccgagacccctacgtctgtgttcgatgtgactgtgatccagtgggt
tctctggatggagggaagtgtgacagtcatactgatatttatctcggaatgattggtggt
cagtgtcgctgtaagcccaatgtccagggtcagcgctgtgactactgcaaagaggggcac
tatggcctcagccaaaatgaccctcttgggtgccaatcatgtaactgtgatccacgtggc
accaacatgatgggaccgctgtgtaattatatcagtggggaatgttcttgcaagagatat
gtgacaggtcgctactgtaaccagtgcatatcagagtactggggactcagtaatgaccat
gcaggctgcagaccctgcgactgtgactttggtggatcgtacagcaaaaggtgcaggatg
gaagatggtcagtgtgactgtcggcctcacctcattggtcatcagtgctcagatgtggag
cctgggtatttctgtgccgctctcgattactacacatatgaagctgaaagagcagtgggc
cactctcctgatagtgctgatctaccggggaagcctcgccctctagttataaatgactgc
acacagcatttcaataaccagctgaggagacacaggcgccatcagcacatcaccccgcag
cagagggcggctctgagacgcatccggcagcttcagcagactcctgatgtgaccattgca
ggcagagagaggtatacagatcagatggtcacctggaccgggccaggctttgctcgggtt
aaagatggcgctggcctcgtgtttaccatcgaagatatctcgtatgccatggagtatgac
atcatgattcgctatgagccagagtctacagaggactgggaggccattgtgagtgtcaca
tctgtgtcactgtccaccagtactcgctgtgggaacctgcttcccactgagcagctctac
actgtcacgctgctacacagcaagaggcacgtcctcatgccccagcctttctgcttcgag
cccagcaaccgctatgtggtggccatccgctttcagcgccatgcagtctctcaaagacac
ctcaatgctcacatcctcgccgactcgcttgtattaatcccccggtatgaggagctgcca
gggttcacaggtaacgatcccctggctgtgcagcggcgagaagacatggtgcgctacatg
tgtctggactcctttatgactacgccaatgccaaatctggctgagatttgtatcaaattg
atctgcagcatctcttctgtcatgcatacgggagcaatatcttgtcactgtgatgctcag
ggttcattgagtgtcgagtgtaaaaagatcggaggtcagtgtcagtgtaaacccaacgtc
attggccgtcattgtaaccagtgtgcaccgaggacatatggatttggaccctatggttgc
actgcctgtgagtgccaccgtgatggctctgatgctcagcagtgtgacccagttacaggg
aggtgcccatgcagacccggggcctttgggcggcagtgctctgaatgccagcctggtcac
tggggcttccctgactgcaggccgtgccagtgtaatggacactcagagacctgtgacccg
cacactggcacatgccttcactgcagggacaacacagcaggccatctatgtgagaggtgc
acgaatgggtattatggtgacccagtgctgggttcaggagaacactgccacccctgtcct
tgcccaggaaacccaggcagtggacattcaaatgcagattcctgtcacatgcaacattcc
tccaaccggatcatgtgccactgcaagccaggatacacaggacatcgctgtgaccgctgt
gctccgggttactatggtcacccagagcaaaaagatggagagtgtcggccatgtgagtgt
aatgggaacattgtggctgaagatcctgactcatgtgacccccacacaggccagtgcttg
aagtgcctgtacaacacagacggaccctcatgctccgagtgcaagcctggctactttggc
aatgccctggccagggactgtaggcgctgtacatgtatgagaatgggaacagaccaggag
tactgcagtgatgaggtgtgttactgtgacaagcaaactggtgcatgtccctgcaggccc
aacattgttggcaataactgtgaccagtgtgctgccaaccactggaacctgggcatggat
gatggctgtgaggcctgtgaatgccatccacagaacagctttagctcacactgcaacttg
atcagcggacagtgtcactgccggcccggttttggaggcaagcagtgcaccgaatgtgag
ctgttcagctggggtgatccagcagtgcgctgtaacgagtgtgattgtcacagacaggga
tcagtgacagagcagtgtgaccgtatcacaggggcatgtgagtgtaaagagtgggcagta
ggccaacactgtaacgagtgcgcccgtggttttactggaggtttccccaaatgtgtgccg
tgccacccctgcttccagctgtgggacgacattgtgtgccaactcaaacatgacatggat
agaatccgcttcatcataaccaagatcctggagatgggcgaggtgcccggtgttggcgac
acccgcatccatgagctggagcagaagttggctgagatccggaagctgctccaggatgga
gaaggagacaggatatatcagcagatcatccaggccattgacgacttgagggccgaggta
gctgtcactgacggccgtttgatgggtgtagagagagaactgaacgtgacaacagagcat
aacaacatcctaaaacacaatttgacatcgcttgagcgagagttctgggatctgaacatc
accctttttcagtggcgcagagagctggagaactccatcagtagtggaattatagatctg
ctaaataaagtgcggaagtactaccaagagtctttggacgctgagcagaagtgcaacgct
tctgtttttgggactcatagtcctgtggaacagtctcgacacacacgcaacatcaccaag
gcactgctggaccagagaaagggccagtttatgcgtaatctcacagctcagaaaaagtcc
ctgtctgagctcaaaaagaaagaagaagacatggataaaaaggtccatcacctgagccaa
aaggtgtgtggcagcagtggcaatgcgagcgctgatggttcatgtccagacagcccttgt
ggaggtgttggttgtaaggacagtaatgattcactggtgtgtggagggccacactgcaac
ggcacagttggcgagtcaatcagggcgctggagaaagccagtgatgtcagcaagaacctg
acagctgtcagtgaggaccttatgaacatggccaaaaagctccaagacattgccacactc
actgagaatgtgaaggcccaggcgatgaacactctggataaagcccggaagaagaaagag
ctctttgaaacatccaataacaaactgaaagatttcatccaaaagatccgagacttttta
actgaggaaggagcagatccagagagcatagagaaagtggcacggcaggttttggccatc
acgctgccagtcaatcggactgtagtggacagcataattctgcagttaaaagacagaatt
gccaacctcactgatatggatggagtcttcaactactccactgagcagctggccaaagcc
aaggagctgcttgatagagccaccaatgaacaggaaaaagcagagaaaattactgatgtt
attaaaaagactaaagaggccatgaacaccactcaggaggccatagagaaggcgaggaca
gtaatagaggaagccttgaaaaacctcaacagcacacagaacgttactgcaatggtggaa
gacaagctctcaaatttagaagccagccttatggatatgatgatgcgtttagctaattta
tcccaagaagtggattttttgaaaaataagacagaacaaaatagacagcaagccaaggaa
gccaaggagctatcagacaatgccactcaggctgcctctgaacttaaaaaggatttgtca
catgttgagactcgctataaggaactaaaagataagattgattctttgggaggagcggca
gtaggcaattttacccagaaagcactggacatgaagaacgaggccgaggatcttctcagg
aaggccaataaggacatggaaacacttaaaaagctggagcgaaaactgcagaagaatgag
cagagaatgcaacagcagcgggatgagctggcggagctggaaagcaatgttacagacatc
cgaaattccatcagagaaaaagtcaatttctataacacctgtcagtaa
DBGET
integrated database retrieval system
