Pangasianodon hypophthalmus (striped catfish): 113533978
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Entry
113533978 CDS
T05759
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like isoform X1
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113533978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
phyp04040
]
113533978
Ion channels [BR:
phyp04040
]
Ligand-gated channels
Glutamate (ionotropic)
113533978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
113533978
NCBI-ProteinID:
XP_026782315
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MTPTSAVLMSGSEASVDSLKSGSPALRSMRNPWRWPRSAVLEYWTVVMVCLVWIQCSCGM
PHVIRIGGIFEQTDGPVSLVSAEELAFKFAVNNINRNRTLLPNTTLTYDIQRINIYDSFE
ASRKACDQLSLGVVAIFGPSHSSSSNAVQSICNALEVPHIQVRWKHHPMDNRDTFYANLY
PDYSSLSYAILDLVQFLKWKTATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQLPLDTTD
TRPLLKEMKRSREFRIIFDCSHVMAAQILKQAQMMGMMTEYYHYIFTTLDLMAINLEPYR
FCGVNMTGFRILNVDNPQVASIVEKWSTEKQIPPKPDSGLLEGIMTTDAALTYDAVHIVS
VSYQHAPQMTVNSLQCHRHKPWRFGGRFMSFIKESQWDGLTGRLCFNKTTGLRTDFDLDI
VNLKEDGLEKVGKWSASGGLNITELPKRNGMNITDSLSNRSLVITTILEEPYVMLKKSDK
ALVGNDRFEGFCIDLLKELAGILGFAYEIRLVPDGKYGFQDDKGQWNGIIRELMEHRADL
AVAPLTITFVREKVIDFSKPFLNTGISILYRRPNNTNNGFFSFLKPMTPDIWVYILLAYL
GVSCVLFVIARFSPYEWYDAHPCNPSSDVVENNFTLLNSFWFGVGSLMQQGSELMPKALS
TRIIGGIWWFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIEYGVVKDGATMS
FFKKSRVSTFEKMWAFMSSKQSTSLVKSIEDGIQRVLKSDYALLMESTTIEYVTRKNCNL
TQFGGIIDSKGYGIGTPKGSPYRDKVTIAILSLLEDGRLHMLKEKWWSGSSCQEDERYET
GPMGIQNLGGIFIVLASGLVLSIFVAIGEFVYKLRKTAEREQVFLQCGGGRDQTVIHVRE
KSETQAAPCTTHGEDGRRDQHAHLQRAPSTGKGQHELQQRCNDARVSMTCLGDGHMRHMP
STVPESMDYGSEMITAFTLNRRDTRNHTAKQNGGASSNPGNDHVLKPMYPTMPLREGGRS
VSFL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgacacccaccagtgcagttttaatgagcggttccgaggcgtctgtggattccctaaag
agcggatcgcccgcgctgagaagcatgagaaacccgtggcggtggccccggagcgccgtg
ttggaatactggacagtggtcatggtgtgccttgtgtggattcagtgctcttgcgggatg
ccgcatgtcatacggataggagggatttttgaacaaacggatggtccagtctcacttgtc
agtgcagaggaactggcctttaaatttgctgtcaataacatcaatagaaacaggacattg
ttgccaaacacaacattaacatatgacatccagcggattaatatctatgatagctttgag
gcctcaaggaaagcttgtgaccagctgtctttaggtgttgtggccatatttgggccatct
catagctcctcgtcaaatgcggtacaatccatctgcaatgcactggaggttccacatatc
caggtgaggtggaaacatcaccccatggacaacagagacacattttatgccaacttgtac
ccggactactcctccctcagctacgccatcctggatctggtacagttcctcaagtggaaa
acagccactgtggtgtatgatgacagcactggtttgattcgactccaggagttgatcatg
gccccttccaggtacaatataaggctgaagatccgacaactccctctggacactactgac
acccgccccctgctgaaggagatgaagaggagccgagagttccggatcatcttcgactgt
agccatgtcatggctgcacagattcttaaacaagcccagatgatgggaatgatgacagag
tactaccactacatcttcactactttggatcttatggccatcaatctagagccttaccgt
ttctgtggtgtcaatatgactggtttccgcatcctgaatgtggataatcctcaagtcgct
tccattgtggagaaatggtccacagagaagcagatccctccaaaacctgactctggtctg
ctggaaggaattatgacgacagatgctgctctgacatatgacgcggtccacattgtatcc
gtctcctaccagcacgcaccacagatgacagtcaactcgctgcagtgtcaccgccacaag
ccctggaggttcggcgggcgcttcatgagctttattaaggagtctcagtgggatggcctg
accggacgattgtgtttcaacaagaccactggcctgaggacagattttgacttagacatc
gtcaacctgaaggaggatggcctggaaaaggtgggaaagtggagtgcttcaggaggcctg
aacatcacagagctccctaagaggaatggcatgaacatcactgactcactctccaaccgc
tccctggtcatcaccacaatactggaggaaccatatgtcatgcttaagaagtctgacaaa
gcacttgttggaaatgaccgcttcgagggcttctgcattgacctgctgaaggaactggct
ggtattctggggtttgcgtatgagatccgtttagtgcctgatgggaaatatggcttccag
gatgacaagggccagtggaatggcatcataagagaacttatggagcatagagcagatttg
gctgtagctccccttaccatcacctttgtgagggagaaggtgattgacttctccaagcca
ttcctgaacacagggatcagcatcctgtaccgccggccaaacaacaccaacaatgggttc
ttctctttcctcaagcccatgacccccgatatctgggtctacatcctactggcctacctg
ggcgtcagctgtgtgctgtttgtcattgccagatttagcccttatgagtggtatgatgcc
cacccatgcaacccaagctctgatgtggtggagaacaactttacactcctgaacagcttc
tggtttggcgtgggttccctcatgcagcaaggttctgagctgatgcccaaagctctctcc
acacggattattgggggcatctggtggttcttcacccttatcatcatctcctcctacaca
gccaacttggcagctttcctgactgtggagagaatggactcccctattgactcggctgat
gacctggccaaacagaccaaaattgaatatggtgtagtaaaagatggagctactatgtca
ttttttaagaaatccagagtctcaacatttgaaaagatgtgggccttcatgagcagcaaa
cagagcacatcacttgtcaagtctattgaagatggcatccaaagggttctgaaatctgac
tatgccctgcttatggagtctacaaccattgaatatgtgactcgcaagaactgtaaccta
acccaatttggaggcattattgacagcaagggttatggcattggcacccccaaaggttca
ccgtatagggacaaagtgaccatagccattttgagcttgctggaggatggacgcctacac
atgctgaaggagaagtggtggagtgggagcagctgtcaggaagatgaacgctatgaaaca
ggcccgatgggcatccagaacctgggtggcatcttcattgtgctggcctcagggctggtg
ctttccatttttgtggccataggggaatttgtctacaaacttcggaaaacagcagaacgt
gaacaggtctttctgcagtgcggtggtggaagagatcaaactgtcattcacgtgcgagag
aagagtgaaacacaagcggcaccatgcaccacccatggcgaagacggacgccgtgatcaa
catgcacaccttcaacgagcgccgtctaccgggaaaggacagcatgagctgcagcagcgc
tgcaatgacgcccgtgtttccatgacatgcctgggtgacggtcacatgaggcacatgcct
agcactgtgcccgagagcatggactatggctccgaaatgataacggcattcaccctcaac
cgcagagacacccgcaaccacacagccaagcagaacggtggcgcgagcagcaacccaggt
aatgaccatgtcctcaaacctatgtatcccaccatgccattgagggagggaggacgctct
gtgtcctttctctga
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