Pangasianodon hypophthalmus (striped catfish): 113536582
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Entry
113536582 CDS
T05759
Symbol
tmc6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phyp02000
]
113536582 (tmc6)
03037 Cilium and associated proteins [BR:
phyp03037
]
113536582 (tmc6)
Transporters [BR:
phyp02000
]
Other transporters
Pores ion channels [TC:
1
]
113536582 (tmc6)
Cilium and associated proteins [BR:
phyp03037
]
Other cilia and associated proteins
Stereociliary proteins
113536582 (tmc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
113536582
NCBI-ProteinID:
XP_026786411
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MAARSVNFDIDAHVMEAGLESPADEDVVHDSFNQLIEEQSQDLNSHAEAIEMYPLTEETG
DDVSSFAVDEYGGMTEPLMDERWSSATLRVLSSMPSRTIGRSRGAILSQYYTRTMQMCRH
RQSRPSIRSFSRSARPSICGHRVDNNAENFDREENKRERLVNNLQNLSVGDRVRMLKAIP
LSLTEKSELRRLALNKTGRSIYLDQVPCCSHLKDRIFIALRQSWYSWLSFLSSLQLWQTA
LKTVSGRFGTGVLSYFVFLRKLFFFNVFLFMVMGLFLVVPQAVQPPVLTSVTSVQYGLEV
LTGTGYFKDSLMYYGYYSNYTFMNCSHVENQGSCGTHLSYNMPLAYFFTIGMAFFITCII
LVYSMSKSFGQSFRIDRSKGLLAIKVFSSWDFKVSKKSSVRLQSENITTQLRELVAEVNR
NKVKSSFWQRMSVLSIQLLAWIICIGSTVVCSLGVYYFSKDVHKIYANNTNNDLRKETSM
LALPVIVSTINLLLPGFFNVVAWMEDYESPCTRNYVAVFRNLMLKVSVLGVLCHHWLGQV
ASDQKQSQCWESFVGQELYRFLLMDFIFTMLDTFFGEFLWRLFSQKVLKKERKPVFDIAR
NVLELIYGQTLAWLGVLFAPLLPAVQVIKLFLLFYMKKTSLMMNCQAPRKPWRASQMTTF
FITLLCFPSFLGASVCVTYTMWTITPSKSCGPFRGLNTMFQAGKKWVEKLAHDNPHLTWL
TWVHTYLVENPFFLFLAAGIFLIIIYFHSQVVDGQRKIIELLQEQIENEGEDKKFLITRL
QDIHERKRPNSQRRSRATREESSFT
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcagctcgtagcgtgaacttcgacatagatgcccacgtaatggaggcagggctggaa
agtcctgcggatgaggatgtggttcatgactctttcaatcagcttattgaggaacagagt
caagatctaaacagccatgcagaggcgatagagatgtaccctctaacggaagagaccgga
gatgatgtttcatcctttgctgttgatgagtatggtgggatgactgaacccttgatggat
gaacgctggtcttcagccactctcagagttctgtcctcaatgcccagtcgcaccattgga
cgcagtcgaggggcaatcctctctcaatattatacccgcactatgcagatgtgcagacac
agacagagccgaccctccatccgctctttctcccggtctgcccggcccagcatctgtggc
catcgtgttgacaacaatgctgagaactttgaccgggaggagaataagagggagcggctg
gtgaataacttgcagaacctgtctgtgggtgatcgagtgcgtatgctgaaagctattcca
ttgagcttgacagagaagagtgaactcagacgtttggccttgaataaaactggccgctct
atctacctcgaccaagtcccctgctgcagccacctcaaagaccgtattttcattgctctg
agacaaagctggtacagctggctgtccttcctctcctcactgcagttatggcagacggct
ctgaagacagtgagtggccgcttcgggacaggtgtcctctcctactttgtcttcctcagg
aagctgttcttctttaacgttttcctattcatggtgatggggctcttcctggtggtgccc
caagccgtgcagcctccggtgctaacctcagtcacatctgtacaatacggcctcgaggtg
ctcaccgggacgggttattttaaggactccttgatgtattacggctactacagtaattat
actttcatgaactgcagccatgttgaaaatcagggttcctgtggcactcatctatcctat
aacatgcctctggcctatttcttcaccattggaatggcattcttcatcacctgcatcatc
ctcgtgtacagtatgtccaagtcttttggacagagtttccggattgaccggtccaaaggt
ctgcttgccataaaagtcttcagttcttgggattttaaagtcagcaagaaatcctctgtt
agactgcaatctgaaaacatcaccactcagctcagagagttggtggcagaggtgaaccgt
aacaaggtgaagtcttcgttctggcagcgtatgtcagttctgtccatccagttgctggct
tggataatatgcattgggagcactgtagtgtgttcccttggcgtgtactacttctcaaag
gatgtgcacaagatatacgcaaacaataccaataacgacctgcggaaggaaactagcatg
ctggcgctccctgtgattgtgtctaccattaacctgctccttcccggcttcttcaatgtt
gtggcctggatggaagattacgagtcgccatgcacacgcaactacgttgccgttttcagg
aatttaatgctgaaagtgagtgtgcttggagtcttgtgtcatcattggctaggtcaagtg
gcatctgaccaaaagcagtcacagtgctgggagagttttgtggggcaggaactatataga
ttcctgctaatggacttcatcttcacaatgctcgataccttctttggagagtttctgtgg
agattgttttcgcagaaggttctgaagaaagaaagaaagccggtgtttgatattgcccgg
aatgttctcgagctcatatacggacagacattagcttggttgggagtgttgtttgcgccc
ctcctgcctgcagtgcaggttatcaagctgttcctgcttttctacatgaaaaagacgagt
ctgatgatgaactgtcaagctcccagaaagccatggagggcgagtcagatgaccaccttc
ttcatcaccctcctctgcttcccctccttcctgggcgcatcggtgtgcgtcacctatacc
atgtggacgataacaccatcaaagagctgtgggccgttccgtggcctcaacaccatgttt
caggcaggtaaaaagtgggtggagaagctggcccatgataacccccatctgacctggctc
acctgggttcatacatatctggtggagaatcctttcttcctgtttctcgctgctggaatc
ttcctaataataatctacttccacagccaagtggtggatggacagaggaagattattgag
ctgctacaggaacagattgaaaatgagggggaagacaagaagtttctcatcactagatta
caagacatccacgagcggaaacgtccaaattcccagcgtcgcagcagggcaaccagagag
gagtccagtttcacatga
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