Pangasianodon hypophthalmus (striped catfish): 113540337
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Entry
113540337 CDS
T05759
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Pathway
phyp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113540337 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113540337 (tbp)
03021 Transcription machinery [BR:
phyp03021
]
113540337 (tbp)
Transcription factors [BR:
phyp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
113540337 (tbp)
Transcription machinery [BR:
phyp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113540337 (tbp)
RNA polymerase III system
TFIIIB
113540337 (tbp)
RNA polymerase I system
SL1/TIF-1B
113540337 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
TFIIA
Motif
Other DBs
NCBI-GeneID:
113540337
NCBI-ProteinID:
XP_026792582
LinkDB
All DBs
Position
Unknown
AA seq
304 aa
AA seq
DB search
MEQNNSLPPFPQSLASPQGAMTPGIHIFSPMMPYGTGLTPQPVQNTNSLSLLEEQQRQQQ
QQQQQQAASQQQGGIVGTSGQTPQLYHSQAVSTTTALPGNTPLYTTPLTPMTPITPATPA
SESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFS
SGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVL
THQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRGEIYEAFENIYPILKGF
RKTT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggagcagaacaacagcttgcctccattcccacaaagccttgcatcgcctcagggggcc
atgacgcctggtatccatatctttagccctatgatgccatatggtacagggcttacgcca
cagccagtacagaacaccaacagcctatcactcttagaggagcaacagaggcagcagcaa
caacagcagcagcagcaggcagcttctcaacagcagggtgggatagtgggaacatcaggc
caaactcctcagctttatcactcacaagcagtttccaccaccacagcactgccaggaaac
acccctctctacacaacccccctaacacccatgacccccatcactcctgccacacctgct
tcagaaagctctggcattgtccctcagctacaaaatattgtgtcaactgtgaacttggga
tgcaaacttgacctgaagacaatagcactgcgagccaggaatgctgagtataatcctaag
cgttttgcggctgtcatcatgagaatacgagaacccagaacaactgctctgattttcagt
tcaggcaagatggtctgcacgggagctaagagcgaggagcagtctcgcctggccgccagg
aaatacgcaagagtagtgcagaaactcggtttccctgccaaatttctagacttcaagatt
cagaacatggtcggaagttgtgatgtcaagttcccgatccgactggagggcctggttctc
acccatcagcagttcagcagttatgagccagagttattccctggtttaatctacagaatg
attaaacccagaattgtgcttttaatattcgtttcaggcaaagttgtactcacaggtgca
aaggtgaggggtgaaatctatgaagcatttgaaaatatatatcctatcttaaaaggattc
agaaagacaacataa
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integrated database retrieval system
