Pangasianodon hypophthalmus (striped catfish): 113542278
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Entry
113542278 CDS
T05759
Name
(RefSeq) transcription factor Sp8-like isoform X1
KO
K09198
transcription factor Sp8
Organism
phyp
Pangasianodon hypophthalmus (striped catfish)
Brite
KEGG Orthology (KO) [BR:
phyp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phyp03000
]
113542278
Transcription factors [BR:
phyp03000
]
Eukaryotic type
Zinc finger
Cys2His2 SP/KLF family and related proteins
113542278
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-met
zf-C2H2_8
Zap1_zf1
zf-C2H2_6
DUF5810
zf-C2H2_9
DUF2225
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
113542278
NCBI-ProteinID:
XP_026795475
LinkDB
All DBs
Position
Unknown
AA seq
456 aa
AA seq
DB search
MATSLLGEEPRLGSTPLAMLAATCNKIGCPSPSAISDNTSSFGKGFHPWKRATASSCSLG
SGLSSSFGVTRNGGALADSFGASGTAASSAFSLTPGASSNSHLGNEYPVFQPPASSASQE
AGHQPVFISKVHASVDGLQGIYPRMSVAHPYESWFKSSHAGLPTGDVGATSASAWWDVGA
GWIDVQNANGAAALQTPLHSGGLQSSLHSPLGGYNSDYSGLSHSAFSTSASPHLLTGGQH
IMDGFKPVLSSYPDSSPSPLGGAGGAMLSAAPSASLAGSPRSSARRYSGRATCDCPNCQE
AERLGPAGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTR
SDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSAGGSAGSGSGGSGGKRGSDT
DSEHSGPGSPSCNSPDLLQPAEALPPSMNGRANSLD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcacttctaggggaggagccgcgattaggttcgacacctttagctatgctg
gctgcgacgtgcaacaagatcgggtgcccttctccatccgcgatctcggataacacgtcg
tccttcggtaagggatttcacccgtggaagcgcgccacggctagcagctgcagtctgggc
tcgggtttatcctccagcttcggcgtgaccaggaacggcggcgctctggcggactcgttc
ggtgcgagtggcacagcggcgtccagcgccttctcactgacaccaggcgcctcctccaac
tcccatctcggcaacgagtaccccgtgttccagcccccggcgtccagcgcctctcaggaa
gccggccatcagcccgtgttcatctccaaagtgcacgccagcgtggacggcttacaaggc
atctacccgcgcatgagcgttgcgcacccgtacgaatcgtggttcaagtcgtcgcacgca
gggctgccgacgggcgatgttggggccacgagcgcttccgcctggtgggacgttggcgcg
ggatggattgacgttcagaacgccaacggcgccgccgcgctgcagacaccgctgcactca
ggaggactccagtcgtctttgcattcgccgctgggcggctacaactcggactactccggt
ttgagtcactctgctttcagcacaagtgcgtcgccacacctgctgaccggcggccagcac
atcatggacggctttaagcctgtactctcttcctacccggactcgagcccatctcccctg
ggcggcgcaggaggtgccatgctgagcgcggccccgtctgcctcactggctggctctccc
aggtcatcagcgcgccgctactcgggccgcgccacgtgcgactgccccaactgccaggag
gcagagcgcctgggacctgcgggtgcgagcttgcgccgtaaaggccttcacagctgccac
atcccgggttgcggcaaggtgtacggcaagacgtcgcacctgaaggcgcatctgcggtgg
cacacgggcgagcggcctttcgtgtgcaactggctcttctgcggcaagcgcttcacgcgc
tccgacgagctccagcggcacctgcgcacgcacacaggcgagaagcgcttcgcctgcccc
gtgtgcaacaagcgcttcatgcgtagtgaccacctgagcaagcacgtgaagacccacagc
gcgggcggctccgcgggctccggctcgggcggtagcggcggcaaaaggggcagtgacacc
gacagcgagcacagcgggccgggcagcccttcatgcaactcccccgacctgctgcagccc
gccgaggcacttccgcccagtatgaacggccgcgcaaactccctcgattaa
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