Scheffersomyces stipitis: PICST_80365
Help
Entry
PICST_80365 CDS
T01023
Symbol
PUF6
Name
(RefSeq) pumilio-family RNA binding domain-containing protein
KO
K14844
pumilio homology domain family member 6
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_80365 (PUF6)
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_80365 (PUF6)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
PICST_80365 (PUF6)
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PICST_80365 (PUF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
CDC45
Motif
Other DBs
NCBI-GeneID:
4851243
NCBI-ProteinID:
XP_001387479
JGI:
80365
UniProt:
A3GG44
LinkDB
All DBs
Position
1:1296028..1298245
Genome browser
AA seq
679 aa
AA seq
DB search
MVSKTKTVKRAAPKELAKSHKKAKIAEKLPSPPTESESEDLESSGNDISDSSEDELDEMD
KDSEDSEDELDNLDEEDDIEEEEDDDDDNEDGPVDPNKKSSKEQHAEQRKLLAERKLQRK
SGNEVQQIKSLWERLRVNKPTPPKEVRDKLCNEIWELSKDVILDLVMKHDASRVVQTLVK
YSSKERRDAVVNALKGNYYTLATSSYGKYLLVKLLHYGSKEARAVIVNELHGKLRKLMRH
KEGAYVVEDLFVLYSSAEQRQQMIREFWGAEYAVFKESGKGKTVLEVTKESTEKKQLITS
NLIGTIKASVEKGSTGFQILHAAMREYVSILEDDIEVNDSAIRDFIDLLNEQFAELVHTQ
EGADVASTLIALANAKERKLIIRSLKSHTNELIKNEYGNLVLITLFSTVDDTVLLHKSFS
AEIFTPELLPELIKDKFSRRPLLYLLKGLDGKYFNPLVQKQIKKYVELAYKKTSKKPQEQ
RRAELQVKALPLLYTGVLSTVNHENPDKTIEKLLSVNIAAQFVTELILTNTESEEVNTKL
RGELVDAIFDRTAQGDILEDFHLVNKVPFISRTLKALIQANEFKFNNESKKLESVKEAVK
IPGIGAEFASRFATEVLDSGKLLDWTTGQGAFVIVSVFEVLQISKDSKFKDLSKELKKIK
KDLSKNKDNKGAQLLLALL
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaagactaaaaccgttaaacgtgcagcccctaaggagcttgccaagagtcac
aagaaggccaaaattgcagaaaagctcccatctccacctactgagtctgaatctgaggac
ttggaatcgtcaggaaacgacatctctgattcctcagaagatgagctagacgaaatggac
aaggacagcgaagattctgaagacgaattggacaacttagatgaagaagatgacatagaa
gaagaagaagacgatgatgatgacaatgaagacggcccagtggatcctaataagaagtct
tccaaggaacaacacgccgaacaacgtaagttgttggctgaacgtaaattacaaagaaag
tctggtaacgaagtgcagcagatcaagagtttatgggaaagacttcgtgtgaacaagcct
acacctccaaaggaagtccgtgacaagttgtgtaatgagatttgggaattatcgaaggat
gttattctcgatttggttatgaagcacgatgcctctagagttgtccaaacccttgtcaag
tactcttcgaaagaaagaagagatgctgtggtcaatgccttgaaaggtaactactataca
ttggctacttcttcgtatggtaaatatctcttggtcaagcttttgcattatgggtccaag
gaggcaagagctgttattgtcaatgaattgcatggaaagttgcgtaagttgatgagacac
aaggaaggtgcctatgtagtagaagatttatttgtgttgtactcttctgccgaacagaga
cagcagatgatcagagagttctggggtgcagagtatgccgtgttcaaggagtcgggcaag
ggaaagactgttttggaagttacaaaagaatccaccgaaaagaagcagcttattacctcc
aatttgatcggtacaatcaaggcatctgtagaaaagggctctaccggtttccagatctta
catgctgccatgagagaatacgtttctatcttggaagacgacattgaagtcaacgactct
gccattagagacttcatcgacttgttaaacgaacaatttgctgaattggtacatacacaa
gaaggtgctgatgttgcttctactttgattgctcttgccaacgctaaggaacgtaagttg
atcatcagatcgttgaaatctcacactaacgaattaatcaagaacgagtacggtaacctt
gtgttgatcaccttgttctccactgtagacgatactgtgttgcttcacaagtcgttcagt
gcagagatctttactcctgaattacttccagaattgatcaaggataagttttccagaaga
ccactcttgtacttattgaagggattggatggaaaatacttcaacccgctcgttcagaag
cagataaagaaatacgtagaattagcatacaagaagacttccaaaaaaccacaggagcaa
agaagagctgaattgcaagtcaaggcgttgcctttactctatactggtgtcttatcaact
gtaaaccacgaaaacccagacaagacgatcgaaaaattgttgtcggtgaatattgctgct
cagtttgtcacggagttgatcttgaccaatactgaaagcgaggaggttaacactaaatta
agaggagaattggtagatgccatcttcgacagaactgcccaaggtgacatcttggaagat
tttcatttggtcaacaaagttccattcatctcgagaactttaaaggctttgatccaagcc
aacgagttcaagttcaacaacgaatccaagaagttggaatcggtcaaggaagctgtaaag
attccaggcattggagctgagtttgctagcagattcgctaccgaagtgttggactctggc
aaacttttggactggaccactggtcaaggagcctttgtcatcgtatccgtgtttgaggtt
ttacaaatactgaaggactccaaattcaaggacctttccaaggaattgaagaaaatcaag
aaggacctctctaagaacaaggacaacaagggtgcccaattattgttggctcttctctga
DBGET
integrated database retrieval system
