Pseudomonas iranensis: HU724_000435
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Entry
HU724_000435 CDS
T07894
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pie
Pseudomonas iranensis
Pathway
pie02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU724_000435 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pie02044
]
HU724_000435 (tssC)
Secretion system [BR:
pie02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU724_000435 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QXI22778
LinkDB
All DBs
Position
complement(89197..90672)
Genome browser
AA seq
491 aa
AA seq
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MSTSAAQEKSAASGEYSILDSIIAETRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAEIDAKLSRQMDEILHHPDFQALESSWRGLQLLVDRTNFRENIKIEILNVSK
EDLLDDFEDSPEVMQSGLYKHIYTAEYGQFGGQPVGAIIANYYMSPSSPDVKLMQYVASV
SCMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRTSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQVIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagcactagcgcagcacaagagaagagcgccgccagcggcgaatacagcattctcgac
agcatcatcgccgaaacccgtctgaccccggacgacgaagcctacgacatcgccaagcgt
ggcgtgtcggcgttcatcgaagagctgctcaagccgcagaacaacggtgagccggtcaag
aaagccatggttgaccgcatgatcgccgagatcgatgccaagctcagccgtcagatggac
gagatcctgcaccacccggatttccaggcgctggaatcgtcgtggcgtggtctgcagttg
ctggtcgaccgcaccaacttccgcgaaaacatcaagatcgaaatcctcaacgtctccaaa
gaagacctgctggacgatttcgaagattcgccggaagtcatgcagtcgggcctgtacaag
cacatctacaccgctgaatacggccagttcggtggtcagcctgtgggcgcgatcatcgcc
aactactacatgtcgccaagctcgccagacgtcaagctgatgcagtacgtggccagcgtt
tcgtgcatgtcccacgcgccgttcatcgctgccgccgggccgaaattcttcggcctggaa
agcttcaccggcctgccggatctgaaagatctgaaagaccacttcgaaggcccgcaattc
gccaaatggcagagcttccgtacctcggaagactcgcgctacgttggcctgaccgtgccg
cgtttcctgctgcgcaacccgtacgatccggaagaaaacccggtgaaatcgttcgtgtac
aaggaaaccgttgccaacagccacgagcactacctgtggggcaacacggcttacgcgttc
ggcaccaagctgaccgacagcttcgccaaattccgctggtgcccgaacatcatcggcccg
cagagcggtggcgcggttgaagacctgcctttgcaccatttcgaaagcatgggcgaaatc
gaaaccaagattcctaccgaagtattggtttccgaccgtcgtgaatacgaactggccgag
gaaggcttcatttccctgaccatgcgcaaaggctccgacaacgcggcgttcttctccgcc
agttcggtgcagaagccgaagttcttcggcatcagcgcagaaggcaaggccgcagagctg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgtctggctcactat
ttgaaagtgttgcagcgcgagcaactcggttcgtggaaagagcgtaccgacctcgagctg
gaactgaacaagtggatccgtcagtacgttgccgaccaggaaaacccgagcgccgaagtc
cgtggccgtcgtccgctgcgcgctgcgcaagtgatcgtcagcgacgttgaaggcgagccg
ggctggtaccgcgtgagcttgaacgtgcgtccgcacttcaagtacatgggcgccgatttc
accctgtcgctggttggcaagctggacaaagagtaa
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