KEGG   Pseudomonas iranensis: HU724_006825
Entry
HU724_006825      CDS       T07894                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pie  Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:pie00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pie03400]
    HU724_006825
Enzymes [BR:pie01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HU724_006825
    5.6.2.6  RNA 3'-5' helicase
     HU724_006825
DNA repair and recombination proteins [BR:pie03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HU724_006825
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QXI23982
LinkDB
Position
complement(1554184..1556673)
AA seq 829 aa
MAKSPDFAKTWFSARDWKPFAFQKQVWAAVKNGESGLLHASTGAGKTYAVWFAALNRFAR
LQPPVAIPRKRKPPAEPLTVLWITPMRALAADTARALQSPVDDLQIPWSIGLRTGDTSSS
ERARQGRRLPTTLITTPESLTLLLARADARTALSSLRMIVVDEWHELLGNKRGVQLQLAL
ARLRHWQPELIVWGVSATLGNQSHAEQVLIPQGGGVSVQGKSEKTLQVDTLLPPAIERFP
WAGHIGLKMLPQVVAELDACASSLVFTNTRAQSEIWYQALLEARPDWAGLIALHHSSLSR
DTRDWVEQAVKNGQLKAVVCTSSLDLGVDFLPVERVLQIGSAKGVARLMQRAGRSGHAPG
RTSRVTLVPTHSLELIEAVAARDAVEQRRIEPRLSPHKPLDVLVQHLVSMALGGGFIPED
LYEEVRGAWAYRDLTAADWAWALAFVRHGGMSLTAYPDYRRVEPDEHGVWRVPDARLARR
HRMSIGTIVSDASINLKFWSKGGGGKQLGSVEEGFIARLKPGDGFLFAGRLLELVRVENM
TAYVKRSTAKKAAVPRWNGGRMPLSNELAEAVVTRFSAAAQGQFNGPEMHALRPLLETQI
RWSGLPTTENLLAEVLKSREGWHLFLYPFAGRQVHLGLASLLAWRVSQRQPVTFSIAVND
YGLELLSATPVDWAAHLDAHLFNADDLLLDVLASLNAGELALRRFREIARIAGLVFAGYP
GAPKSTRQVQASSGLFFQVFKQYDADNLLLAQAGEEVLREELDIRRLEQTLERINQMKLD
VHQVKRPTPLGFPLLVERMRESMSSEKLADRIRRMVGDLEKTADNGKSS
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggcgaaatcccccgactttgcaaaaacctggttcagcgcccgcgactggaagccgttc
gcctttcagaaacaggtgtgggcggcggtgaaaaacggtgagtccggattgctccacgcc
agcaccggcgccggcaaaacctatgcggtgtggtttgctgcgctcaaccgcttcgcccgt
ctgcaaccgcccgtggccataccgcgcaaacgcaaaccgccggccgagccgttgacggtg
ctgtggatcacgccgatgcgcgccctcgccgccgataccgcccgcgcgctgcaaagcccg
gtagatgatttacagattccgtggagcatcggcctacgcaccggcgacaccagcagcagc
gaacgcgcccgccagggccgacgcctgccgacgacgctgatcaccaccccggaaagcctg
actctgctactggcccgcgccgatgcgcgcacggcgttgtcgagcctgcgcatgatcgtc
gtcgatgaatggcacgagttgctcggcaacaagcgtggcgtgcaattgcaactggccctc
gcccgcctgcgtcattggcagccggaactgatcgtttggggcgtgtccgccaccctcggt
aatcaatcccacgccgagcaagtgctgatcccacagggcggcggcgtcagtgttcagggc
aaaagcgaaaaaaccctgcaagtcgacaccctgctgccaccggccatcgagcgtttcccc
tgggccggccacatcggtctgaagatgctgccgcaagtggtggccgagctcgacgcctgc
gccagcagcctggtgttcaccaacacccgcgcgcaatcggagatctggtatcaggcgctg
ctggaagcgcggccggactgggccgggttgatcgcgctgcaccacagctcactgtcacgc
gatacccgcgactgggtcgagcaggcggtgaagaatggccagttgaaagcggtggtctgc
acttcgagcctggacttgggtgtggatttcctcccggtcgagcgcgtgctgcagatcggc
tcggcgaaaggcgtcgcgcgcttgatgcaacgtgccggccgttccggccacgcgccgggg
cgcacctcgcgggtgacgctggtgccgacccacagtcttgaactgatcgaagcggttgcc
gcacgcgacgccgtcgaacagcggcgcatcgagccgcgtctgtcaccgcacaagccgctg
gatgtgctggtccagcatttggtcagcatggcccttggcggtgggtttattcctgaagac
ttgtacgaagaagtccgtggtgcctgggcttatcgtgacctgacagcggcagactgggcc
tgggcgctggcgttcgtacgccatggcgggatgtctcttacagcgtatccggattaccgc
cgggtcgagccggacgaacacggcgtctggcgtgtgccggatgcgcgtctggcgcggcgc
catcgcatgagcatcggcaccatcgtcagcgacgcgagcatcaacctgaaattctggagc
aagggcggcggcgggaaacagctgggcagcgtcgaggaaggctttatcgcccggctgaaa
cccggcgatggtttcctcttcgccgggcgcttgctggagctggtgcgggtggaaaacatg
accgcctacgtcaaacgcagcaccgcaaaaaaagccgccgtgccgcgctggaatggcggg
cgcatgccgttatccaacgaactggccgaagcggtggtgacgcgcttcagcgccgctgct
caaggtcagttcaacggcccggaaatgcacgcgctgcggccgctgctggagacgcagata
cgctggtccggcttgcccaccacggaaaatctgctggccgaggtactgaaatcccgcgaa
ggctggcatcttttcctctatccgttcgccgggcgccaagtgcatctgggactggcgagc
ctgctggcgtggcgcgtcagtcagcggcaaccggtgaccttctcgattgccgtgaatgat
tacggcctggaactgctcagcgccacgccggtggattgggccgcgcatctcgacgctcac
ctgttcaacgccgatgacttgttgctggatgtgctggccagtctcaatgccggtgaactg
gcgttgcgccgcttccgcgaaatcgcgcggatcgccgggctggtcttcgccgggtatccg
ggcgcaccgaaaagcacccgccaggtgcaggcgtcgagtggtctgtttttccaggtattc
aaacaatacgacgccgacaatctgctcttggcccaggcaggggaagaagtcctacgcgag
gaactggatattcgtcgtttggaacagacattggagcggatcaatcagatgaaactcgac
gtgcatcaggttaaacgtcctaccccactgggctttccgctgctggtggagcggatgcgc
gagagcatgagttcggaaaaactggctgacaggatcagaagaatggtcggtgacctggaa
aaaaccgctgataacggaaaatcgtcgtga

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