Pseudomonas iranensis: HU724_016140
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Entry
HU724_016140 CDS
T07894
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pie
Pseudomonas iranensis
Pathway
pie02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU724_016140 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pie02044
]
HU724_016140 (tssK)
Secretion system [BR:
pie02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU724_016140 (tssK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
QXI20561
LinkDB
All DBs
Position
3624382..3625728
Genome browser
AA seq
448 aa
AA seq
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MSSRNPVIWHEGLFVKPQHFQQQVRAAEAAVHQRLHSLNDALYGFSELTLNSEYLNFGKV
AVTQARGIMPDGSVFDIPHDLAPPSPLEIADSNAIGQIVYLALPLRSIGALEVRWPDQYG
NSRYIVRREEIRDTHSDDGDQVGMDLAVPNLQLMLERSDRSAFTGIALGRIKDKRPDGSL
VMDEHFYPTSLSLQAVPALHRYLGEVAGLMRERARNLAQRIGSPGQSGVADVSDFNLLQT
LNRLYPLFQHLARQRQVHPEQLYVALAQACGELVTFTDEGHLPQEYPAYQHENLRESFQL
LEHTLRRALGTVLQPRALSLPIIEQQYGVRSAALNDKRLLDNAEFILAVRAELPAETLRQ
QLPRQIKISSTEGLEQLVSLQLPGIPLRPLPVAPRHLPFHAGFSYFELDRHHPAWQSLSS
GSGFGFHIAGEFPDLELQFWAIRSERDE
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgtaaccccgtcatttggcatgagggtttgttcgttaaaccccagcacttc
cagcaacaggtccgcgccgccgaagccgccgtgcatcagcgcctgcacagcctcaacgat
gcactttatggcttcagcgaactgaccctgaacagcgaatacctgaactttggcaaagtc
gccgttacccaggcgcgaggcatcatgcccgatggtagcgtcttcgatattccccacgac
ctcgccccgccctccccactggagatcgctgacagcaacgcgatcggccagatcgtctac
ttggccctgccgctacgttccatcggtgccctcgaagtgcgctggcccgaccagtacggc
aacagccgctacatcgtccgccgcgaagaaatccgcgacacccacagcgatgacggcgat
caggtcggcatggatctggccgtgcccaatttgcaactgatgctcgaacgcagcgaccgc
agcgccttcaccggcatcgccctgggcaggatcaaagacaaacgcccggacggcagcctg
gtaatggatgagcacttctaccccaccagcctgtccctgcaagcggtgccggcgttgcac
cgctaccttggtgaggtggccgggctgatgcgcgagcgagcgaggaatctggctcagcgg
ataggttcaccgggacaatcgggtgtggctgatgtcagcgactttaacctgctgcaaacc
ctcaatcggttgtacccgctgttccagcacctggcccgccaacgtcaggttcaccccgag
cagttgtacgtcgccttggctcaagcctgcggcgaactggtgacctttaccgacgagggc
cacctgccgcaggaatatccggcctatcagcacgaaaacctgcgcgagtcgttccagcta
ctcgagcacaccttgcgtcgcgccttgggcacggtgctgcaaccacgagcgctgtcattg
ccaatcattgagcagcagtacggcgtgcgcagcgccgcgttgaacgacaaacgcctcctc
gacaacgccgagttcatcctcgccgtgcgcgccgaactgcctgcggagaccctgcgtcag
caactgccgcggcagatcaagatcagctccaccgaaggcctggagcaactggtcagcctg
caactgccgggcattcccctgcggccgctgccggtggcgccgcgccatctgccgttccat
gccggcttcagctacttcgaactcgaccgccatcaccccgcctggcaaagcctgagtagc
ggcagcgggttcggcttccatattgccggtgagttcccggatctggagttgcagttctgg
gcgatcaggagtgagcgagatgaataa
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