Paenibacillus sp. IHBB 10380: UB51_22710
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Entry
UB51_22710 CDS
T03836
Name
(GenBank) recombinase RecR
KO
K06187
recombination protein RecR
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UB51_22710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_22710
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UB51_22710
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
UB51_22710
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Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
HHH_8
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AJS60802
UniProt:
A0A0D3VGM8
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All DBs
Position
5006230..5006829
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AA seq
199 aa
AA seq
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MYYPEPIARLIESFTRLPGIGPKTASRLAFHVLTMKEDDVIDFAKALVSVKRNLHYCSIC
CNITDTDPCRICQDKTRDPSVICVVQDPKDLVAMERTKEFNGYYHVLQGAISPMEGIGPD
DIRLKELLNRLSDERVQELILATNANIEGEATAMYVSRLIRPFDIIVTRIAHGLPVGGDL
EYADEVTLSKALEGRRELR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
ttgtattatcccgaaccgattgcaaggctgattgaatcatttacccgactaccgggtatt
ggtccgaagacagcgagtcgtctagcctttcacgttcttacgatgaaagaagacgatgtc
attgactttgccaaggcactcgttagtgtcaaacggaatctgcactactgttctatctgt
tgcaatattaccgatactgatccttgtcggatatgtcaggataagacgcgagatccgtct
gtgatctgtgttgttcaagatcccaaagatcttgtggccatggagcgtaccaaagaattt
aatggatattaccatgtgcttcagggagcaatctccccgatggagggcattggacccgac
gacatacggttaaaggaattgttgaacagacttagtgatgagcgtgttcaggaactaatt
ctggcgaccaatgcaaatatcgaaggggaagcaacagcaatgtatgtttctagattgatt
cgtccttttgatattatagtgacccgtattgcccatgggctgcctgtaggtggcgatttg
gagtatgcggatgaggttaccttatccaaggcattagaaggaagacgcgagctacgctga
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