Pirellula sp. SH-Sr6A: VN12_01095
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Entry
VN12_01095 CDS
T04360
Symbol
mucD
Name
(GenBank) putative periplasmic serine endoprotease DegP-like precursor
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
pir
Pirellula sp. SH-Sr6A
Pathway
pir01503
Cationic antimicrobial peptide (CAMP) resistance
pir02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pir00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VN12_01095 (mucD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
VN12_01095 (mucD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pir01002
]
VN12_01095 (mucD)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pir03110
]
VN12_01095 (mucD)
Enzymes [BR:
pir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
VN12_01095 (mucD)
Peptidases and inhibitors [BR:
pir01002
]
Serine peptidases
Family S1: chymotrypsin family
VN12_01095 (mucD)
Chaperones and folding catalysts [BR:
pir03110
]
Other chaperones and cochaperones
DegP / HtrA
VN12_01095 (mucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin_2
PDZ_2
Trypsin
PDZ_6
PDZ
Peptidase_S46
Motif
Other DBs
NCBI-ProteinID:
AMV30680
UniProt:
A0A142XVX2
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All DBs
Position
complement(338368..339582)
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AA seq
404 aa
AA seq
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MQGETRTSEFPVTQVIRYNGFTPTEPVAEHPSGLWLQISGCFFGLAIAFSSGWVSAQDKV
QEQEGEQRTALRPALPLYFSTSLDAPTALTKVPLSDEIARIAKGTDPNNKQQLVSLQKQQ
TEVAKRAPLVTVNLQHGNTQGSGVIVSGDGYILTAAHVAGRPNQRIHVVLHDGTRVEGKS
LGLNRNEDAGLVKIVHPVRSPDNPWPHASLGSSTDLQPGSWVMAVGHPGGWQEDRPAVVR
IGRLLRNIDSTLITDCALIGGDSGGPLFDLEGKLIGIHSRIGVEVDENMHVPLDVFYKSH
ERLIRSEAWGSLPGFRPYIGVEGASVEDSGGRCVIERVTPKGPADRAGIEPGDIIVRFDG
QKITVFKELKDSVDAMVPGDSVEVELERNSRRMIVRIMIGSLNP
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggcgaaacccgtacttcggagtttcctgtgacccaagtgattcgatacaacggc
tttactcctactgagccggtcgccgagcatccgtccggtttgtggctccagatttccggt
tgcttcttcggtctcgccatcgccttttcaagcggatgggtcagcgcacaggacaaggtc
caagagcaagagggggagcaacgaacggctcttcgccccgctcttccgctctacttctcg
acttctttggacgctcccactgccctcaccaaggtgcctctgtccgatgagatcgcgagg
atcgcgaaagggaccgatcccaacaacaaacaacaactggtcagcttgcaaaagcagcaa
accgaagtcgcgaagcgtgcgcccttggtcacggtcaatttgcaacacggcaatacacag
gggagcggagtcatcgttagcggcgacggatacatcctgaccgccgcacacgtggccggt
cgtcccaatcaacggatccatgttgtcttgcacgatggaacccgcgttgagggcaagtcg
ctaggtctcaaccgcaatgaagatgccgggttggtcaagatcgtccatcccgtccgaagc
cccgacaacccttggccacacgcgtcgctaggaagttcgaccgatctgcaaccaggtagt
tgggtgatggcggtcggtcaccccggcggttggcaggaagatcgcccagcggtggttcga
atcggacgattacttcgcaacatcgactcgaccttgatcaccgattgcgcattgatcgga
ggagatagtggcggtcccctgttcgacctggaaggcaagctgattggaatccacagccgg
atcggcgttgaagtcgacgaaaacatgcacgtcccgctcgatgtcttctacaaaagtcac
gagcgattgatccgcagtgaagcatggggatcgctccccggctttcgcccctacattggt
gtagagggagcgagtgttgaagatagcggaggccgctgcgtgatcgagcgggttaccccg
aaagggcccgcggatcgggcaggcattgaaccgggtgacatcattgtgcggtttgacggt
caaaagatcaccgtgttcaaagaactgaaagattccgtcgatgcaatggttccgggtgat
tcggtagaagtcgaattggaacgcaattcgagaagaatgatcgtgcgaatcatgatcggt
tccttgaacccttaa
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