Prevotella jejuni: CRM71_03320
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Entry
CRM71_03320 CDS
T05287
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pje
Prevotella jejuni
Brite
KEGG Orthology (KO) [BR:
pje00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pje03009
]
CRM71_03320
Enzymes [BR:
pje01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CRM71_03320
Ribosome biogenesis [BR:
pje03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CRM71_03320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Met_10
TRAM
Methyltransf_15
Methyltransf_25
MTS
PCMT
N6_N4_Mtase
PrmA
Methyltransf_11
Cons_hypoth95
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AUI54455
UniProt:
A0A2K9HCB2
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All DBs
Position
I:complement(851170..852594)
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AA seq
474 aa
AA seq
DB search
MSRKRKPLPILENVTIEAVAAEGKCVTHVDDKVIFVPFVVPGDVVDLQIRKKKRNYCEAT
VIRFISKSNIRQEPMCEHFGICGGCKWQNLPYEEQLKAKQQQVYDQLSRIGKVELPEFRP
IMGSVHTKEYRNKLEFGCANKRWYTAEELQALPEDAGLEEGAIGFHITGAFDKVYPIEKC
WLMDNLCNELRNDIRDYAHQTGMKFYDIRAQHGLLRDIMVRNSNTGEWMVLIQFHYDEEG
DDERAKALMQHIADRFPQITSLFYVDNQKGNDTFNDLDLTLFKGNDHIFETMEDLKFKVG
PKSFYQTNTEQAYHLYSVAREFANLTGDELVYDLYTGTGTIANFVAKKAKQVIGIEYVPE
AIEDAKVNSEVNKIDNTLFYAGDMKDILTEDFIHEHGRPDVIITDPPRAGMHQDVVNVIL
GASPKRIVYVSCNPATQARDLALLDVDYKVAAVQPVDMFPHTPHVENVVLLEKR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaaaagaaagccattacccattctggagaatgtcacaatagaggctgtagca
gccgaaggaaagtgtgttacgcacgtagacgacaaggttatctttgttccttttgtagta
ccaggagacgttgtagaccttcagatacgcaagaagaagcgcaactactgtgaagctacc
gtcatccgcttcattagcaagagcaatattcgtcaagaacctatgtgtgaacatttcggt
atctgcggtggttgtaagtggcagaacctcccttacgaagagcaactaaaggcaaagcaa
caacaagtttacgaccaactaagccgtatcggtaaggttgagcttccagagttccgccct
atcatgggttctgtacatacaaaggaatatcgtaacaagctcgaattcggctgcgctaat
aagagatggtacacagctgaggagcttcaagctctgccagaagacgctggcttagaagaa
ggagctatcggattccacatcacaggagcttttgacaaggtctaccctatcgagaaatgc
tggttgatggacaacctctgcaatgaactacgtaatgacattcgcgactatgcacaccag
acagggatgaagttctatgacattcgtgcacagcatggcctactccgtgatattatggtg
cgtaactctaataccggcgaatggatggtactcatacagttccactatgatgaggaggga
gatgacgaacgtgcaaaagcattaatgcagcatattgccgaccgtttcccacagattaca
tcactcttctacgttgataatcagaaaggtaacgacacctttaacgatctcgaccttact
ctcttcaagggaaatgaccatatctttgagacaatggaggacttgaagtttaaggtggga
ccaaagagcttctaccagaccaataccgaacaagcataccatctttattctgtagcgcgc
gagtttgctaaccttacaggtgacgaacttgtttacgacctgtatacaggaacgggaacc
atagccaatttcgtcgccaagaaggccaaacaagttattggtattgagtatgttccagaa
gctatagaagatgcaaaggtcaattctgaggttaataaaatagacaatacgctcttctat
gcaggtgacatgaaagacatccttacggaagatttcatccatgagcacggtcgcccagat
gtcatcatcaccgaccctccacgtgctggcatgcaccaagacgttgtaaacgtaatcctt
ggagcaagtccaaaacgaattgtttatgtgagttgcaaccctgccacacaggcacgcgac
ctcgctctactcgatgttgactacaaggtagcagctgttcaacccgtagacatgttccct
cataccccacacgttgagaatgtagtactattagaaaagagatag
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