Prevotella jejuni: CRM71_05345
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Entry
CRM71_05345 CDS
T05287
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pje
Prevotella jejuni
Pathway
pje03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pje00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CRM71_05345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pje03019
]
CRM71_05345
03400 DNA repair and recombination proteins [BR:
pje03400
]
CRM71_05345
Enzymes [BR:
pje01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CRM71_05345
Messenger RNA biogenesis [BR:
pje03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CRM71_05345
DNA repair and recombination proteins [BR:
pje03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CRM71_05345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
zf-CXXC
EURL
Motif
Other DBs
NCBI-ProteinID:
AUI54798
UniProt:
A0A2K9H8T1
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All DBs
Position
I:1314490..1316382
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AA seq
630 aa
AA seq
DB search
MSYLDILHQYWGYPDFRGIQKDIIESIGSGKDTLGLMPTGGGKSITFQVPALAQEGVCLV
ITPLIALMKDQVDHLRQQGITAAAIYSGMRHDDIVSTLDNCSFGGIKLLYISPERIGSDL
FQTKLRHIKVSFITVDEAHCISQWGYDFRPSYLQIENIRKLVPDAPILALTATATPDVVD
DIQDRLGFKEKNVFRMSFERRNLAYVVRQTEDKDAEMVHILQSLPKTAIVYCRSRKRTKE
IAKMLTEHGISATWYHAGLEPGVKDQRQNDWQTDKIRVMVATNAFGMGIDKPNVRVVIHI
DCPSSLEAYFQEAGRAGRDGNKAYAVLLYNGNDRRTLQKRIEDTFPPKDYIQTVYEHLAY
FYQIGVGSGYGCIFEFPIDKFCNTFKHFPIRVNAALTILQRAGYIDYELNPDTKARVRFL
LNRDELYRLDSLSDKEDNIVTALLRNYGGLFSDNGYIDESYLGQEAGLDRNQTYMILTNL
SKKRIINFIPRKNIPLISYTQDRIDGVDVVLSKEVYENRKEEFIKRINSVINYAQNERVC
RSRQLLSYFGENKSTDCGQCDVCLSHTKEDDTNEKEQIRKQLLTLLEDGHKHAITEIRQL
NDDWDLVQQVMREMILEEEILLDGSFLLLP
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatctcgacattcttcatcaatattggggctatcctgatttccgtggtattcag
aaggacatcatcgagagtatcggttcaggaaaggataccttaggactaatgccaacagga
ggaggaaagtccataactttccaagtaccagcattagcccaagaaggagtgtgcctggtc
attactcctcttattgcgttgatgaaagaccaggttgaccatctccgtcaacaaggcatc
actgctgctgctatttattctggcatgcgccatgatgacattgtatcaaccttggataac
tgttcttttggtggaataaagttactttatatctctcctgagcgtatagggtctgacctt
tttcaaacaaaactacgacacataaaagtgagtttcatcactgttgatgaagcccattgt
atcagtcaatggggttatgactttcgcccttcgtacttacagattgagaacatccgaaag
ttagtacctgatgcacctatccttgccttaactgcaacagctacaccagatgtcgttgat
gatattcaagaccgcttaggatttaaagagaagaatgtcttccgaatgagctttgagcgt
aggaacttagcttatgtcgtacgccagactgaagacaaagatgccgagatggtacatatt
ctgcaatccttacccaagacagctattgtctactgccgtagcagaaaacgcacaaaggag
attgcaaagatgctcacagaacatggtatctcggctacatggtatcacgcaggcttagaa
cctggtgttaaagaccaacgccagaacgactggcagactgataagatacgtgtcatggtt
gcgacgaacgcatttggtatgggtattgacaagcctaacgtacgtgtagttatccatatt
gattgcccgagttcattggaggcttacttccaagaggcgggtcgtgcaggtcgtgatggt
aataaggcatacgctgttctactttataatggcaatgacagacgcacactgcagaagcgc
atcgaagataccttcccacctaaagactatatccaaacagtctatgaacacttagcctac
ttctatcagataggcgttgggagtggctacggatgtatatttgagtttccgattgacaaa
ttctgcaatactttcaagcattttcccatacgtgttaatgcagcattgaccatccttcaa
cgagcaggatatattgattacgaacttaacccagacactaaggcacgtgttcgcttcctt
ctcaatagggatgaactttaccgattagactcgctgagcgataaggaagacaatatcgta
acagcactacttcgcaattatggtggactcttctctgacaatggctacatagatgaaagt
tatcttggacaggaagctgggttggatagaaaccaaacctacatgatactcaccaatctt
agtaaaaagcgtatcatcaatttcatccctcgtaagaatataccacttattagctacaca
caagatcgtattgacggcgttgatgttgttcttagtaaagaggtatatgaaaatcgaaaa
gaagaatttatcaaacgcatcaactctgttatcaattacgcacaaaatgagcgagtgtgt
cgcagcagacagctactatcctatttcggagaaaataaatcaaccgactgcggacaatgt
gatgtttgcttatcgcataccaaagaggatgatacgaacgagaaagaacaaatcagaaaa
caactgctgacactcttagaagatgggcataagcatgctattacagagattcgtcaactg
aatgatgattgggaccttgttcagcaagttatgcgagagatgattctggaagaggaaatc
cttttggatggaagtttcttacttctaccctaa
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