KEGG   Pseudomonas juntendi: L1P09_19630
Entry
L1P09_19630       CDS       T08267                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pju  Pseudomonas juntendi
Brite
KEGG Orthology (KO) [BR:pju00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pju03400]
    L1P09_19630
Enzymes [BR:pju01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     L1P09_19630
    5.6.2.6  RNA 3'-5' helicase
     L1P09_19630
DNA repair and recombination proteins [BR:pju03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    L1P09_19630
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: UJM11501
LinkDB
Position
4218234..4220681
AA seq 815 aa
MPTTDLANAWFSKRGWKPFAFQRRVWAAVERGESGLLHASTGAGKTYAVWLAALRAFKAQ
AQGRQAAPMQVIWITPMRALAADTARALQAPLDELGLPWNVGVRSGDTSSAERARQARRL
PSVLVTTPESLTLLLTRAQAEADFATLRLIVVDEWHELLGNKRGVQLQLALARLRRWHPG
LPTWGLSATLGNLQHARDVLLPEGGLLVQGRQDKALQVDTLLPGAIERFPWAGHMGLKML
DQVSREVDASASCLVFTNTRAQAELWYQALLESRPDWAGLIALHHASLARETRDWVERSL
KQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRSRITLVPT
HSLELVEAAAARQALEAGHIEARFSPRLCMDVLVQHLVSMALGSGFRADQLLAEVRSTWA
FAGLRDSQWQWALDFVCHGGSSLTAYPDYQRVERHADGVYRVASERLARRHRMGIGTIVS
DASLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVENMTAYVRRSTAR
KAAIARWNGGRMPLSSELADALVEQLDAAAHERFTGPEMRAVRPLLALQAQWSALPTTAT
LLAETFKSRQGWHLFLYPFAGRMANLGLANLIAWRVSRQQPLSVSIAVNDYGFELLSPGH
VDWATHLPQALGTEQLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQKSMRQIQA
SSGLFYEVFRKHDAGNLLLGQARDEVLSEELEIDRLHRQLLKMAGLQLDLRALKRPGPLA
FALLVEGMRETLSTEKLADRIARMVAELEQAANKE
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgcccaccaccgacctcgccaacgcctggttcagcaaacgtggctggaaaccgttcgcg
ttccagcgccgggtctgggcggcggtagagcgcggcgagtctggcctgctgcacgccagc
accggtgccggcaaaacctacgcggtgtggctggcggcactgcgcgcattcaaggcccag
gcacaggggcgccaggcagcccccatgcaggtgatatggatcacgcccatgcgtgccctg
gccgccgacactgcgcgcgccctgcaagcgcccctcgatgagctgggtttgccgtggaat
gtcggcgtacgcagcggcgacaccagcagtgccgagcgggcccggcaagcgcggcgcctg
cccagcgtgctggtcaccaccccggaaagcctgaccctgctactgacgcgtgcccaggcc
gaagccgatttcgccacgctgcgcttgatcgtggtcgacgaatggcacgagttactgggt
aacaaacgcggcgtacaactgcagttggccttggcccgcctgcgccgctggcaccctggc
ctgccgacctggggtttgtctgccaccttgggcaacctgcagcatgcacgggacgtgctg
ctgcccgagggcggcctgttagtgcaaggccggcaagacaaagcactgcaggtcgatacc
ctgctgcccggggccatagaacggtttccctgggccgggcacatgggcctgaaaatgctc
gaccaggtcagccgcgaggtcgacgccagcgccagttgcctggtgttcaccaatacccgg
gcccaagccgagctctggtaccaggccctgctggaaagccgccccgactgggccggcctg
atcgccttgcaccatgcctcactggcccgggaaacccgcgactgggtcgaacgcagcctc
aagcagggcagcctgaaggcggtgatctgcacctccagcctggacctgggggtagacttt
ctgcccgtggagcgggtgctgcaaatcggctcggccaagggcatcgcacgcctgatgcaa
cgggccggccgctcgggccatgcccccgggcggcgctcccggataaccctcgtacctacc
cacagcctggagctggtcgaggcagcagccgctcgccaggcactggaagctgggcacatc
gaggcgcgtttctccccccggctgtgcatggacgtactggtgcagcacctggtcagcatg
gccttgggcagtggctttcgcgccgaccagttgctggccgaagtgcgcagcacctgggcg
ttcgccggcttgcgcgacagccagtggcagtgggccctggactttgtctgccacggcggc
agttcactgacggcctaccccgactaccagcgcgtcgagcgccatgccgacggcgtttat
cgagtggccagcgagcgcctggcgcggcgccatcgcatgggcatcggcaccatcgtcagc
gatgccagcctgcagctcaagtactggagcaagggcggcggcggcaagacgctgggcagt
gtcgaggaggccttcatcgcccgcctgcggcccggcgatacgctggtgttcgccgggcgg
gtgctggaactggtgcgggtggaaaacatgaccgcctacgtacgccgcagcaccgcacgc
aaggctgccatagcacgctggaacggcgggcgcatgcccttgtcgagcgagctggccgat
gcgctggtcgaacagctcgacgctgccgcccacgaacgttttaccggcccggaaatgcgc
gccgtgcgcccgctgctggcactgcaagcccaatggtcggctctacccaccacggctacg
ctgctggcggagaccttcaagtcgcgccagggctggcatctgttcctgtaccccttcgcc
gggcgcatggccaacctgggcctggccaacctgattgcctggcgggtgagccgccagcaa
cccctgtcggtatcgattgccgtaaatgactatggcttcgagctgctcagccctggccat
gtggactgggcgacgcacttaccgcaggcgctgggcaccgagcagctgctggaggatgtg
ctggccagcctcaacgcgggtgaaatggcgctacgccgtttcagggaaattgcccagatt
gccgggctggtgtttggcggctatccggcggcgcagaaaagcatgcggcagattcaagct
tccagtggcctgttctacgaggtgtttcgcaaacatgatgcaggcaacctgctgctcggc
caggcccgtgacgaggtgctgagcgaggaactggaaattgaccgcctgcatcgccaactg
ttgaaaatggccggcctgcaactggacctgcgggcattgaagcggccggggccgctggcg
ttcgccttgctggtggagggcatgcgcgagacgttgagcaccgagaagctggcggaccgt
attgcgcgaatggtggcagaactggaacaggcggcgaacaaggaatga

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