Paenibacillus kyungheensis: PQ456_07785
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Entry
PQ456_07785 CDS
T08956
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pka
Paenibacillus kyungheensis
Pathway
pka03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pka00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PQ456_07785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pka03019
]
PQ456_07785
03009 Ribosome biogenesis [BR:
pka03009
]
PQ456_07785
Enzymes [BR:
pka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PQ456_07785
Messenger RNA biogenesis [BR:
pka03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PQ456_07785
Ribosome biogenesis [BR:
pka03009
]
Prokaryotic type
rRNA helicases
PQ456_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Helicase_RecD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WCT57396
LinkDB
All DBs
Position
1777595..1779178
Genome browser
AA seq
527 aa
AA seq
DB search
MTKFADFGLDEKVLQAVMELGFEESTPIQAQAIPIAMSGSDMIGQAQTGTGKTAAFGIPL
INKIERSEDKIVALIMAPTRELAIQVAEEIEKLSRFKGIRSLPIYGGQDIVRQIRALKKK
PQIIIGTPGRLLDHINRKTIKLDDVQTVVLDEADEMLDMGFMEDIQSILKQVPEERQTML
FSATMPANIKRLAQQFLKNPQHVSVIPKHVSAPLIDQSYIEVNERQKFDALSRLLDMESP
ELAIVFGRTKRRVDELAEALQKRGYTADGLHGDLSQNQRDSVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGAAYSFVTPRELDHLHFIERVTN
QKIARKPLPSLAEAIEGKQRITAERLLELVQDDTTPLNEYKGIAIQLLEQYDSVNLLSAA
IKLLTGEKKDAQVDLTPEDPIRAKRRKPDVRSGGRKPGGSYNRGGSSTGGYKGNSSSGGR
GGYSSGGSSSGGGYKGNKDAGRDRNKPRTTSSENRRPAPKRDDSFNA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
ttgactaaatttgcagatttcgggttagatgaaaaagtactacaagcggtaatggagcta
ggttttgaagaatcaacacctatccaagcacaagctattccaattgctatgagcggcagt
gacatgatcggacaagctcaaacaggtacaggtaaaacagcagcattcggcatacccctt
attaacaagatcgaacgttcggaagataaaattgtagcattgattatggcaccaactcgt
gagttggcgatccaagtagcagaagaaatcgagaaattatcccgctttaaaggtatccgt
tcattgccaatctacggtggacaagatatcgttcgtcagatccgcgctttgaaaaagaaa
cctcaaattattatcggtacacctggtcgcttgcttgaccatataaaccgtaaaacaatc
aaactagatgatgtacaaactgtagtattggatgaagcagatgaaatgcttgatatgggt
ttcatggaagatatccaatctattttgaaacaagttccagaagagcgtcaaacaatgttg
ttctcagcaactatgcctgctaacatcaagcgtttagcgcaacaattcttgaaaaaccct
caacatgtttctgtaattccaaaacacgttagcgcacctttgattgatcaatcttatatc
gaagtgaatgagcgtcaaaaatttgatgcattgtctcgcttgttagatatggaatctcca
gagctagcaatcgttttcggacgtacaaaacgtcgtgttgatgagttagcagaagctttg
caaaaacgtggctatacagcagacggtttgcatggtgacttgtctcagaaccaacgtgat
agcgttatgcgtaaattccgtgatggtagtattgatgttctagttgctacagacgtagca
gcacgtggacttgatgtatctggcgtaactcatgttgttaactttgacttgccacaagat
ccagaaagttatgttcaccgtatcggtcgtacaggacgtgctggtaaagaaggcgcagct
tactctttcgtaacaccacgcgaattagatcatttgcactttatcgagcgtgtaacgaac
caaaaaatcgcgcgtaaacctctaccatctttggcagaagcgattgaaggtaaacaacgt
attacagctgagcgcttgcttgagctagtacaagacgatacaactcctttgaacgaatac
aaaggtattgctatccaattgttagaacaatatgattctgtgaacttgctttcagcagca
atcaaattgttaactggtgagaaaaaagacgcacaggttgacttgactcctgaagatcca
attcgtgcaaaacgtcgtaaacctgatgttcgctctggtggacgtaaaccaggcggtagc
tataaccgtggtggaagtagcacaggcggatacaaaggcaacagcagcagtggcggacgc
ggtggatacagcagcggcggaagttctagcggtggcggatacaaaggtaacaaagatgct
ggacgtgatcgtaacaaaccacgtacaactagcagcgaaaaccgtcgtccagctccaaaa
cgtgacgattctttcaacgcataa
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