Pseudomonas kribbensis: DLD99_08870
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Entry
DLD99_08870 CDS
T06348
Name
(GenBank) succinyl-CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
pke
Pseudomonas kribbensis
Pathway
pke00020
Citrate cycle (TCA cycle)
pke00640
Propanoate metabolism
pke00660
C5-Branched dibasic acid metabolism
pke01100
Metabolic pathways
pke01110
Biosynthesis of secondary metabolites
pke01120
Microbial metabolism in diverse environments
pke01200
Carbon metabolism
Module
pke_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pke_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pke00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DLD99_08870
00640 Propanoate metabolism
DLD99_08870
00660 C5-Branched dibasic acid metabolism
DLD99_08870
Enzymes [BR:
pke01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DLD99_08870
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
OKR_DC_1_N
ATP-grasp
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
AXI60580
UniProt:
A0A345RMR4
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All DBs
Position
1905198..1906364
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AA seq
388 aa
AA seq
DB search
MNLHEYQGKQLFAEYGLPVSTGFAVDTPEAAAEACDKIGGNEWVVKAQVHAGGRGKAGGV
KLVRSKEDAKAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRR
IVFMASTEGGVDIEKIAHDTPEKILKATIDPLVGAQPFQGRELAFQLGLEGKQVAQFAKI
FVGLAKLFKDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPKLKTFHDPSQDDP
REAHAAKFELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE
AFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKIPVVVRLEGNNAELGAKV
LAESGLNIIAATSLTDAAQQVVKAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcacgagtatcagggtaagcagctgttcgctgaatacggcctgccagtttcc
actggtttcgcagtagacaccccggaagcagcagcagaagcttgcgacaaaatcggcggc
aacgagtgggttgtcaaagcccaggttcacgccggtggtcgcggtaaagcgggcggcgtc
aagctggttcgcagcaaagaagacgccaaagccttcgcacagcagtggctgggcaagcgt
ctggtgacttaccagactgatgccaatggccagccagtcaccaagatcctggttgaatcg
tgcactgatatcgctaaagagctgtacctgggcgctgtcgttgaccgttcgagccgtcgc
atcgtgttcatggcttccaccgaaggtggcgtggacatcgagaaaatcgctcacgacact
ccagaaaaaattctgaaagccactatcgatccactggttggcgctcagccattccagggt
cgcgagctggcattccagctgggtctggaaggcaagcaggttgctcagttcgccaagatc
ttcgtaggtctggccaagctgttcaaggatcacgacctggctctgctggaagtgaacccg
ctggtgatcaaggccgacggcgatctgcactgcctggacgccaagatcaacatcgacgcc
aacgcaatgtaccgtcagcctaagctgaagactttccacgatccgtcccaggacgatccg
cgcgaagcgcacgctgccaagttcgaactgaactacgtagcgctggaaggcaacatcggc
tgcatggtgaacggtgccggcctggccatgggtaccatggacatcgtcaacctgcacggc
ggcaagccagccaacttccttgacgtaggtggtggtgctaccaaagaacgcgttaccgaa
gctttcaagatcattctgtccgacagcaatgtcgctgcagtactggttaacatcttcggc
ggcatcgttcgttgcgacatgattgccgaaggcatcatcggtgcagtgaaagaagtcggc
gtgaaaatcccggttgttgttcgtcttgaaggcaacaacgctgaactgggcgctaaagta
ctggcagaaagcggtttgaacatcatcgctgctaccagcctgaccgacgctgctcaacaa
gtcgttaaagctgcggagggcaagtaa
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