Paraburkholderia kirstenboschensis: RW095_24335
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Entry
RW095_24335 CDS
T09457
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pkf
Paraburkholderia kirstenboschensis
Pathway
pkf03420
Nucleotide excision repair
pkf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pkf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RW095_24335
03430 Mismatch repair
RW095_24335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pkf03400
]
RW095_24335
Enzymes [BR:
pkf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RW095_24335
DNA repair and recombination proteins [BR:
pkf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RW095_24335
MMR (mismatch excision repair)
Other MMR factors
RW095_24335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
WOD19375
LinkDB
All DBs
Position
1:366785..369148
Genome browser
AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQHGLASPATILAVTF
TNKAAREMMSRLSALLPIDTRGMWIGTFHGLCNRMLRAHHRDAGLPATFQILDTADQLSA
IKRLMKGLNIDDEKYPAKNLQYFINNAKEQGLRPKDVDATDNFNRKFVELYEAYDQQCQR
EGVVDFPELLLRCYELLAHNPPLRAHYQARFKHILVDEFQDTNKLQYAWLKLLAGQTNSI
FAVGDDDQSIYAFRGANVGNMRDFEHEFNVRHLIKLEQNYRSHGHILDAANQLIANNSRR
LGKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIKALISTGTSRSEIAILYRSNAQSRTI
EHTLVNAGIAYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVAGKAGSSLASFANLIGKMRADTQQMSLPETVEYVVRASG
LADFYQNEREGQDRLENLQELVNAAAAFVSEEGYGMDTPARSIPLRPGATAAPELAVATD
DPNTVVLDAPGIADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQEAVQLMTVHAAKGLE
FTAVFITGLEEGLFPHENSAMESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NIRSRFFDELPQETLKWLTPKVEAGARWGGRSDNAGYGRDWFARPDRQQGYGGGASTTAA
PLPAFANEQRAAEAGFRVGQQVFHTKFGEGTITALEGGGADAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatctgctagccaatctcaaccccgaacaacacgccgccgtcacgctccccaac
gagcccgcgctcattctcgccggcgcgggcagcggcaaaacccgcgtgctcatcacacgc
atcgcgtggctcatccagcacgggcttgcgtcgcccgccaccattctggccgtaaccttc
accaacaaggccgcgcgcgaaatgatgtcgcgcctgtcggcgcttttgcccatcgacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatcat
cgcgacgccggcttgcccgccaccttccagattctcgataccgccgaccagttgtccgcg
atcaagcgtctgatgaagggcctgaacatcgacgacgaaaagtacccggccaagaatctc
cagtacttcatcaacaacgcgaaggaacaagggctgcggccgaaagacgtcgacgccacc
gacaatttcaaccgcaagttcgtcgaactctacgaagcctatgaccagcagtgccagcgc
gaaggcgtggtcgactttccggaactgctgctgcgctgctatgaactgctcgcgcacaat
ccgccgctgcgcgcgcattatcaggcgcgcttcaagcacattctcgtcgacgagtttcag
gacacgaacaagctgcaatacgcgtggctcaagctgctcgcggggcagacgaattcgatc
ttcgctgtcggcgacgacgaccagtcgatctacgcgttccgcggcgccaacgtcggcaac
atgcgcgacttcgaacacgagttcaatgtccggcatctgatcaagctcgagcagaattac
cgctcgcacggccatattctcgacgcggccaatcagttgatcgcgaacaattcgcggcgt
ctcggcaagaatctgcgcaccgacgccggtcatggtgaaccggtccgtgtttatgaatcc
gcgacggattcgcaggaagccggctggatcgtcgaggaaatcaaggcgctgatcagcacc
ggcacgtcgcgcagcgaaatcgcgattctctaccgcagcaacgcgcagtcgcgcacgatc
gagcacacgcttgtcaatgcgggcatcgcgtatcgcgtgtatggcggcttgcgctttttc
gagcgccaggaagtcaagcacgcgctcgcgtatctgcgtctgatagacaatccgaacgac
gacaccgcgtttgcgcgcgtcgtcaatttccccacgcgcggcatcggcgcgcgctcgatc
gagcagctcgcggacgcggcgcgcctgtacaactgctcgatggcagcggcgattccgtat
gtcgccggcaaggcgggctccagtcttgcgagcttcgcgaacctgatcggcaagatgcgc
gcggatacgcagcagatgagcttgccggaaaccgtcgagtacgtggtccgcgcaagtggc
ctggcggacttctatcagaacgagcgcgaaggtcaggaccggctcgagaacttgcaggaa
ctcgtcaacgctgccgccgcgttcgtcagcgaagagggctacggcatggacacgcccgcg
cgctccatcccgctgcgtccgggggccaccgccgcgcccgaactggcagtcgcgaccgac
gacccgaacaccgtagtgctcgacgcgcccggcatcgccgaccccgcgcaaaacccggac
accatgacgccgctcgccggcttcctgtcgcacgcgtcgctcgaagcgggcgacaaccag
gcgcaagccggccaggaagccgtacaactaatgacagtgcacgcggccaagggcctggaa
ttcacggccgtgttcatcacgggtctcgaagaggggctgtttccgcacgagaacagcgca
atggagtcggacgggctcgaggaagagcgccgcctgatgtacgtggccatcacgcgcgcg
aaggagcgcctgtatttgtcgttcgcgcaaagccggatgctgcacggccagacgcgctac
aacattcgctcgcgtttcttcgacgaattgccgcaggaaacactcaagtggctcacgccg
aaagtcgaggcgggcgcgcgctggggcggccgctcggacaacgcgggctatggccgtgac
tggttcgcccgacccgaccgtcagcaggggtacggcggcggggcgtcgacgacggccgcg
cctttgccggcctttgcgaatgagcagcgcgcggcggaggcgggcttccgcgtcggccag
caggtgtttcacaccaagttcggcgaaggcacgatcaccgcattggaaggcggcggcgcc
gacgcgaaggcgcaagtcaagttcaagcgccacggcgagaagtggctcgcgctcgcggtc
gcgaaactgcaggcggtcgaatga
DBGET
integrated database retrieval system
