Stutzerimonas kunmingensis: LW136_09860
Help
Entry
LW136_09860 CDS
T08242
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkg
Stutzerimonas kunmingensis
Brite
KEGG Orthology (KO) [BR:
pkg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkg03032
]
LW136_09860 (topA)
03400 DNA repair and recombination proteins [BR:
pkg03400
]
LW136_09860 (topA)
Enzymes [BR:
pkg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LW136_09860 (topA)
DNA replication proteins [BR:
pkg03032
]
Prokaryotic type
DNA Topoisomerases
LW136_09860 (topA)
DNA repair and recombination proteins [BR:
pkg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LW136_09860 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UIP34698
LinkDB
All DBs
Position
2071210..2073813
Genome browser
AA seq
867 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSANKEPVKRGKAAAAEAPA
LSPKEKAKRQLVTRMGVDPEHGWKAKYEILPGKEKVIEELRRLAKEADTIYLATDLDREG
EAIAWHLRESIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDLNRVNAQQARRFLDRVVG
YMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFVPEEYWEVHADLANAQQAKVRF
EVARENGEAFKPLNEAQATAALDKLKGAQYSVSKREDKPTSSKPSAPFITSTLQQAASNR
LGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVGMVRGFIESEFGDKYLPEKPNVYS
SKEGAQEAHEAIRPSDVNMRPTQLSGMERDAERLYELIWRQFVACQMPPAQYLSTSVTVA
AGNFELRAKGRILKFDGYTKVMPQQSKAGEDDVLPEMNKGDDMKLLKLDPSQHFTKPPAR
YSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVSLHNRRFYSEKMGDIVTERLSESFNN
LMDYGFTAGMEEHLDDVAQGERDWKHVLDEFYGDFRKKLEVAEASENGMRANQPTLTDIP
CKVCGRPMMIRTASTGVFLGCSGYSLPPKERCKSTVNLIPGDEIAADDEGESESRVLLGK
HRCPICSTAMDAYLLDETQKLHICGNNPDCSGYEIEKGQYRIKGYEGPSLECDKCGSEMQ
LKTGRFGKFFGCTNAECKNTRKLLKNGEAAPPKMDAVKMPELKCEKVDDTYVLRDGASGL
FLAASQFPKNRETRAPLVRELIPHKDEIDPKYHFLLDAPQKDPEGRFAVIRFSRKTKEQY
VQTEVDGKPTGWKAFYDGGKWKVEDKR
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcgctggtcatcgtggaatcaccggccaaggccaagacaatcaacaagtat
ttgggtaaccagtacgtggtgaagtcgagtatcggccatatccgcgaccttcccaccagc
ggttctgccaacaaggagccggtcaagcgcggcaaggccgcggccgccgaggcgccagcg
ttgtcgccgaaggagaaggccaagcgccagctcgtcacgcgtatgggcgtcgacccggag
cacggctggaaggccaagtacgagatcctgccgggcaaggagaaggtcatcgaggaactg
cgtcgtctggccaaggaagccgacaccatctatctcgcgaccgacttggatagagagggg
gaggccatcgcctggcacctgcgcgaatcgattggcggcgatgacagccgctacaagcgc
gtggtgttcaacgagatcaccaagaaggcgattcaggaggcgttctccaagcctggtgag
ctcgatctgaaccgggtcaacgcgcagcaggcgcgtcgtttccttgatcgtgtggtcggc
tacatggtgtcgccgctgctgtgggcgaagatcgcccgcggtctgtctgccggtcgcgtg
cagtcggtggcggtgaagctggttgtcgagcgcgaacgcgagatccgtgctttcgttccg
gaagaatactgggaagtacacgcggacctggcgaatgctcagcaggccaaggtgcgcttt
gaggtcgcgcgtgaaaacggcgaagccttcaagccgctcaacgaagcgcaagccactgct
gcactggataagctcaagggcgcgcagtacagcgtcagcaaacgcgaagacaaaccgacc
agcagcaagccctcggcccccttcatcacttcgaccctgcagcaggcggcgagcaatcgc
ctcggcttcggcgtgaagaagaccatgatgatggctcagcgcctgtacgaagccggttac
atcacctacatgcgtaccgactcgaccaacctctccgctgatgcggtcggcatggtgcgc
ggtttcatcgaaagcgagttcggtgacaagtacttgccggagaagccgaacgtctattcg
agcaaggagggcgcccaggaggcgcacgaggcgattcgtccgtccgacgtcaacatgcgg
ccgacccagctgtcaggcatggagcgtgatgccgagcgcctctatgagctgatctggcgc
cagttcgttgcctgccagatgccaccggcacagtacctgtccaccagcgtgaccgtcgct
gccggcaatttcgagttgcgcgccaagggccgcatcctgaagttcgacggctacaccaag
gtcatgccgcagcagagcaaggccggtgaggatgacgtcttgccagagatgaacaagggc
gacgacatgaagctgctcaagctcgacccgagccagcacttcaccaagccgccggcgcgc
tactccgaagccagcctggtcaaggagatggagaagcgcggtatcggccggccgtccacc
tacgccgcgatcatttcgacgatccaggaccgcggctacgtctcgctgcacaaccgccgt
ttctattcggagaagatgggtgacatcgtcactgagcgtctgtccgagagcttcaacaat
ctgatggattacggcttcactgccggcatggaagagcatctcgacgacgtagcccagggc
gagcgcgactggaagcacgtgctggacgagttctacggtgacttccgcaagaagctcgag
gttgccgaagccagcgagaacggcatgcgtgccaaccagccgaccctgaccgatatcccc
tgcaaggtctgcggtcggccgatgatgatccgtaccgcttccaccggcgtgttccttggc
tgctccggctacagcctgccgccgaaggagcgctgcaagtcgacggtcaacctgatccca
ggtgacgagattgcggccgatgacgagggcgagtccgaatcccgcgtgctgcttggcaag
caccgctgtccgatctgcagcaccgcgatggatgcctatctgctcgacgagacgcagaag
ctgcatatctgcggcaacaacccggattgctccggttacgagatcgagaagggccagtac
cgcatcaagggctatgaaggtcccagcctggaatgcgacaagtgcggcagcgagatgcag
ctcaagaccggccgtttcggcaagtttttcggttgcaccaatgccgagtgcaagaacacc
cgcaagctgctgaagaacggtgaggccgcgccgccgaagatggatgcggtgaagatgccc
gagctcaagtgcgaaaaggtcgatgacacctacgtgctgcgtgacggcgcttccgggctg
ttccttgctgccagtcagttcccgaagaatcgcgaaacccgcgcgcccctggtgcgtgag
ctgattccgcacaaggacgagatcgatcccaagtaccacttcctgctcgatgcgccgcag
aaagatccggaaggccgctttgcggtcatccgcttcagccgcaagaccaaggagcagtat
gtgcagaccgaagtggacggcaagccgaccggctggaaggcgttctacgacggcggcaag
tggaaggtcgaagacaagcgctga
DBGET
integrated database retrieval system
