Paramormyrops kingsleyae: 111843785
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Entry
111843785 CDS
T05788
Symbol
ythdc2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
pki
Paramormyrops kingsleyae
Brite
KEGG Orthology (KO) [BR:
pki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pki03041
]
111843785 (ythdc2)
Enzymes [BR:
pki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111843785 (ythdc2)
Spliceosome [BR:
pki03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111843785 (ythdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Helicase_C
R3H
HA2_C
OB_NTP_bind
DEAD
AAA_19
Ank_2
HA2_N
Ank
ATPase
nSTAND3
Ank_4
PhoH
AAA_22
UvrD-helicase
AAA_23
AAA_30
ResIII
SRP54
Ank_5
AAA_7
Methyltransf_5
T2SSE
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-GeneID:
111843785
NCBI-ProteinID:
XP_023667413
Ensembl:
ENSPKIG00000016010
LinkDB
All DBs
Position
Unknown
AA seq
1443 aa
AA seq
DB search
MHAYVISGIGAPVADECLRGSCMRYSSSRIFEVTIMSYSSTASGKSTMNKSRQSRSSGGQ
CLKDIRINEEVKIAVNMSLERFRYSEQKEMEFPSSLTSTERAFIHRLAQSLGFISKSRGK
GSNRFLTIRKKDGSESAQSIMTFNLMPNAKLVVRSLLQRFPVTSKERVDLLPRTERGVSM
AMDVDSSRDKNRTSGRLNNGIPQVPQPRGQSELEFFRRSLPVYERQDEIIKAIKDKKVVL
IVGETGSGKTTQIPQFILDDCCEQGSPCRIICTQPRRLAAIAMAERVATERGETIGQTVG
YQIRLESRVSPKTLLTFCTSGVLLRTLMAGDTTLSSITHIIVDEVHERDGLTDFLLTKMK
DMVQKLPTLKLILSSAALDVDLFVRYFGSCPVIYIEGRCFEVKELFLEDILRTTGYANKE
MIKYRKEMQKEEMQQNSLTEWCKAQDGRSRPEQQRAKAAACVLQESALLEGGDSIFCQLN
EKDAASLEPWLVKEMDACIADIFLNQDADSFVQLFNLIISENVSVDYRHSDTSVTPLMTA
AGRGFLSQTEQLLSMGADVNMKASNGWTALDWARHFNQAEVVDLLESYHSSQEVRRLDES
SLVHAANTELSTEDQELLKVYHHSFDDEKVDLDLIMHLLHNIFQNSEEGAILIFLPGYDE
IVSLRDRILYDDKRFADNSQRFQVFTLHSNMQTSDQKKVLKSMPPGVRKIILSTNIAETS
ITVSDVVFVINSGKVKEKSFDALNQVTMLRMVWTSKASTLQRKGRAGRCRLGFCFHLFSR
LRFNNMLEYQVPQLLRMPLQELCLHTKLLAPISCSIAEFLSKAPEPPPVIMVRNAVQMLK
TIDAMDPWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAHREPFILPA
LASQKRAAMLSQKRFASGSFSDHMALLRAFQAWQKARSDGWERVFCEKNFLSQATMEMII
GMRTQLLGQLRAIGFVRARGGGDIRDVNLNSENWAVVKAALVTGMYPKIIHMHRENICLM
GSKEKKVRLHPASVLSQPPCQKLPPASGQTAALQALPTDWLIYDEMTRAHRIASIRCCSV
VTPVTVTIFGGCAKLPSTALQEPTAKSDGVGDSSDSEVEDRSTNHLVHMKIDEWLNFKLE
RETASLLFQFRQKWQCLFLRRIRSPSKPWSQADEAALRALVSVLSMEEQAAGLLQPAGIG
QRPRPICPEESPQSPSWRCSSHMGPAEAELTDVSSVSESVSKTPPPPAGSMAKAHREKGA
SQPKRLGDDRLLQSAGRSAGRNLSCSSQSVSPSSHHLSVKSPSSRLSTLVRYFIMKSSNL
RNIDLSQQRGIWSTTPSNELKLNRAFVDSSVVFLIFSVQGSGQFQGYARMSSAIGLERCQ
DWGSAGLGGVFRVEWVRKDSLPFQLAQQLVNPWNDNKKVQISRDGQELEPQVGDQLLQLW
EKI
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcttacgtcatttccgggattggtgcgcctgtagctgacgagtgtttgagagga
agttgtatgcgctattcgtctagtaggatatttgaagtaactatcatgtcctattcaagc
accgcatcaggaaaatctacgatgaataaatccagacaaagcagatccagtggggggcaa
tgcctaaaagacatccggattaatgaagaagttaaaattgctgtcaatatgtctttggaa
agattccgatacagtgagcaaaaagaaatggaatttccttcctccctgacaagcactgaa
cgagcctttattcatcgcttggcccagtccttagggttcatttcaaaaagtcgaggaaaa
gggtcaaacagatttcttacaattagaaaaaaggatggttctgagtcggcacagtccata
atgaccttcaatttgatgcctaacgccaagctcgtagtgcgcagcctcctgcagagattt
cctgttactagcaaagagcgcgtagacctgctgccgcgtactgagcgaggcgtatccatg
gccatggatgttgacagcagccgggataagaacaggacaagcggtcggctgaataacggg
ataccgcaggttccccagccccggggccaatctgaactggagtttttccgtcgctctctc
cctgtctatgaacggcaagatgagatcatcaaggctatcaaagataaaaaggtggtcctg
attgtaggtgaaacaggatctggaaaaacaacacagatcccgcagttcattctggatgac
tgctgtgagcagggcagtccctgccgcattatctgcacacagccccggaggctggcagct
atcgccatggcggagcgcgttgccaccgagcgcggagagaccatcggccagaccgtgggc
taccagatccgcctggagagcagggtttcccccaaaacactcctcaccttttgcacgagt
ggggtactgcttcgtaccctcatggcaggagataccaccctgtcaagcatcactcacatc
attgtggatgaagtccatgagagggacggcctgactgacttcctgcttacaaagatgaaa
gacatggtgcaaaaattacctacactgaagctgatcttatccagtgcggcccttgatgtt
gacctctttgtcagatactttggatcctgtcctgtaatatatattgaaggaagatgcttt
gaagtaaaagaactttttctggaagatatcttacggacaactggatatgccaacaaagaa
atgattaaatacagaaaggagatgcaaaaagaggaaatgcagcagaactcactgacagag
tggtgcaaggctcaagatgggcgctcgaggccagaacaacagagggcaaaggcggcagca
tgtgtcctacaggagagtgccctgctggaaggaggggacagcatcttctgccagctgaat
gaaaaagatgctgcatccttagagccttggctagtgaaagagatggatgcatgtattgct
gatatttttctcaatcaagatgctgattcttttgtgcagctgttcaacctcatcataagt
gagaatgttagcgttgactacagacacagtgacaccagtgtgacccctctgatgacagca
gctggaagagggtttctcagtcagactgagcagctgttaagtatgggagccgatgtgaac
atgaaggcctcaaatggctggacagcattggactgggctagacatttcaaccaggctgaa
gtggtggatcttctggaatcataccactcttctcaggaggtgagaagactggatgaatcc
tccctagtccatgctgccaacacagagctaagtactgaagaccaagagctcctcaaggtt
tatcaccacagctttgatgatgagaaggtagacctggatctcatcatgcacctgcttcat
aatatcttccagaactctgaggagggtgcaattttgatcttcctacctgggtatgatgaa
attgtatcgcttcgagatcgtattttgtacgatgataaacgatttgcagataattcacaa
aggttccaggtttttactctacattcaaacatgcaaacctctgaccagaagaaagttctg
aaaagcatgcctccgggtgttcgcaaaataattctgtcaaccaacattgctgagacgagc
attactgtcagtgatgttgtctttgtgattaattctggcaaagttaaagagaaatcgttt
gacgctctgaaccaggtgaccatgctaaggatggtgtggacatcaaaggccagcaccctt
cagaggaagggaagagctggacgctgcagactaggattttgtttccatctcttcagccga
ctgaggttcaacaacatgttggaataccaagtgcctcagcttctgcgtatgcctctgcag
gagttgtgtttgcacaccaagcttctggcccccatatcctgctccattgctgagtttctc
tccaaagccccagaacctccacctgttattatggttagaaatgctgtgcagatgctgaag
acaatcgacgctatggatccttgggaagacctgacggaacttggctaccatttggctgat
ctgccggtggagccccacctggggaagatggttctatgtgctgtggtgctcaagtgcctg
gaccctattctgaccattgcctgcacactggcacacagggagccctttatcctgcccgct
ctggcatctcaaaagagggcggccatgttgtcccagaagcgcttcgcttcgggcagcttc
agcgaccacatggcccttctcagggcattccaggcatggcaaaaagcacgaagtgatggc
tgggaaagggtcttctgtgagaagaatttcctgtcacaggcaacgatggagatgatcata
ggcatgaggacacagctgctgggtcagctccgagccataggttttgtgcgggcaaggggc
ggaggtgacatccgtgacgtgaacctgaattctgagaactgggcggtggtgaaggcggcg
ctggtgacaggcatgtaccccaaaatcatacatatgcaccgcgagaacatctgcctgatg
ggctccaaagagaagaaggtgcgactgcaccccgcatctgtgctgagccagcctccgtgt
cagaagcttcctcctgctagcggtcagactgcggcgctgcaagcgctgcccacagactgg
ctcatctatgacgagatgaccagagcccatcggattgccagcatacggtgctgctctgtg
gtcacacctgttacagtcacgattttcggagggtgtgccaagctacccagcaccgctcta
caggaacccactgcgaaaagcgacggagtcggggatagcagtgacagtgaggtggaggat
cggtccactaaccacctggtccacatgaagattgatgagtggttgaatttcaagctagag
cgtgaaactgctagcctgctgttccaattcaggcagaaatggcagtgtctgttcctgcgg
cggatccgttccccctccaagccctggtcccaggcggatgaggccgctctcagggcactg
gtgtcagtcctgagtatggaggagcaggcagctggtctgctgcagccggctggcattggc
caaagaccccggcccatatgcccagaggaatcaccccaatcaccctcctggaggtgcagc
agccatatgggcccagctgaggctgagctgacggacgtctcatctgtgtcagaaagtgtc
tctaagacacccccaccccctgcaggctcgatggctaaagcacacagggagaagggggct
tcacagcccaagcgacttggtgatgaccgtctgcttcagtctgctggcaggtctgcgggc
aggaatctcagctgctccagtcagtctgtgagcccatcatcccaccatctgtcagtgaag
tcaccttcctctaggctcagcacccttgtgcgctacttcatcatgaaaagtagtaacctg
cgcaacatcgatctttcccagcaaagaggcatctggtccaccacaccaagtaatgaactc
aaactcaaccgtgcctttgtggacagcagcgttgtcttcctcatcttctctgtgcagggc
tcgggtcaatttcaggggtatgcccgcatgtcctcggctatagggttggagcggtgccag
gactggggctcagctggacttgggggggttttcagagtggagtgggtccgtaaggacagc
cttcccttccagctggcccaacagctggtcaacccctggaatgacaacaagaaggtacag
atcagccgagatggacaggaattggagccacaagttggagatcagctgctgcaactatgg
gagaaaatctaa
DBGET
integrated database retrieval system
