Pseudomonas kielensis: Q1W70_19440
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Entry
Q1W70_19440 CDS
T09328
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pkj
Pseudomonas kielensis
Brite
KEGG Orthology (KO) [BR:
pkj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pkj03032
]
Q1W70_19440 (topA)
03400 DNA repair and recombination proteins [BR:
pkj03400
]
Q1W70_19440 (topA)
Enzymes [BR:
pkj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Q1W70_19440 (topA)
DNA replication proteins [BR:
pkj03032
]
Prokaryotic type
DNA Topoisomerases
Q1W70_19440 (topA)
DNA repair and recombination proteins [BR:
pkj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Q1W70_19440 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WKL51632
LinkDB
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Position
4149504..4152125
Genome browser
AA seq
873 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE
VPALSPKEKARKQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
REGEAIAWHLREAIGGDESRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDR
VVGYMVSPLLWSKIARGLSAGRVQSVAVKLVVEREREIRAFNPEEYWEVHADLGTAKGAN
VRFEVARENGEAFKPLNEAQAMAALEKLKSSSYTIAKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVAMARTYIEGEFGGKYLPETPN
VYSSKEGAQEAHEAIRPSDVNTDPSKLSGMERDAERLYELIWRQFVACQMLPAKYLSTTV
SVAASGFELRAKGRILKFDGYTRVMPQMAKPGDDDVLPDMAQGDVLKLIKLDPSQHFTKP
PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLSES
FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAESPEHGMRANQPVMT
DIPCVTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL
RGKHRCPICSTAMDAYLLDEKRKLHICGNNPDCDGYEIEQGSYRIKGYEGPSLECDKCGS
EMQLKTGRFGKFFGCTNATCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA
SGLFLAASQFPKNRETRAPLVIEIVPHKDEIDPKYHFLCEAPKKDPDGLPAVIRYSRKTK
EQYVQTEVEGKPTGWKAFYDGGKWVVEDKRVAK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaatcgctggtcattgtggaatccccggctaaggccaagaccatcaacaagtat
ctgggcaaccaatacgtggtgaagtcgagtatcggccatatccgagacctgcccaccagc
ggttcggctagcgccagcaaagagcctgccgccaagcgcggcaaggcggctgctggtgaa
gtgccggcgctgtcgcctaaggaaaaggcgcgcaagcagttggttgcgcgcatgggtgtc
gatccggaccacggctggaaagccaagtacgagatcctcccgggcaaggaaaaggtcatt
gaagaactgcgtcggctcgccaaagacgccgacaccatctatctcgcaacggacttggac
cgcgaaggggaagccattgcctggcacctgcgcgaagccatcggtggggatgagagtcgt
tacaagcgcgtggtgttcaacgaaatcaccaagaaggcgatccaggaagccttctcccag
ccaggcgagctggatatcgaccgggtcaacgcccagcaggcgcggcgcttcctcgatcgc
gtcgtgggctacatggtctcgccgctgctgtggtcgaagatcgcccgtggcctgtcggct
ggccgtgtacagtcggttgccgtgaagctggtggtagagcgtgagcgcgagattcgtgcg
ttcaaccccgaagagtactgggaagtccacgctgatctcggcaccgccaagggcgccaat
gtgcgtttcgaagtggcccgtgaaaacggcgaagccttcaagccgctcaacgaagcccag
gccatggcggccctggaaaagctcaagtcgtccagctacaccatcgccaagcgtgaagac
aaaccgaccagcagcaagccgtcggccccgttcatcacctccaccctgcagcaggccgcc
agtaaccgcctgggcttcggtgtgaagaaaaccatgatgatggcgcagcgtttgtacgaa
gcgggctacatcacttatatgcgtaccgactcgaccaacctctcggctgatgccgtggcg
atggcgcgtacttacatcgaaggcgagttcggcggcaagtacctgccggaaaccccgaat
gtctacagcagcaaggaaggcgcccaggaggctcacgaagccattcgtccttccgacgtg
aataccgatccaagcaagctgtcgggcatggagcgggacgctgagcgtctctacgagctg
atctggcgccaattcgtcgcgtgccagatgctgccggccaaatacctgtcgaccaccgtc
agcgtcgctgccagcggcttcgagctgcgtgccaagggccgcatcctgaagttcgacggc
tacacccgcgtaatgccgcaaatggccaagccgggcgacgatgacgtgctgccggacatg
gcccagggcgacgtgctcaagctgatcaagcttgatccaagccagcacttcaccaagccg
ccggcgcgctactcggaagcgagcctggtcaaggaaatggaaaaacgcggtattggtcgc
ccatcgacgtatgcggcaatcatttcgaccatccaggaccgtggctacgtcgcgctgcac
aaccgtcgtttctattcggaaaaaatgggtgacatcgtcaccgagcgtctgtccgagagc
ttctccaacctcatggactacggctttaccgccggcatggaagagaacctcgatgacgtc
gcccagggcgaacgtgactggaaaaacgtgctggacgagttctacggcgacttcaagaag
aagctcgaagtggccgagagtccggaacacggcatgcgggccaaccagccggtaatgacc
gacatcccgtgtgtgacctgcggtcgcccgatgcagatccgtaccgcgtcgaccggcgtg
ttccttggttgctcgggctacagcctgccgccgaaagaacgctgcaaggccaccgtcaac
ctggtgccgggcgatgaaatcgccgcggacgacgagggtgaatcggagtccctggtgctg
cgcggcaaacaccgttgcccgatctgcagcaccgcgatggatgcttacctgctggatgag
aagcgcaagctgcacatctgcggtaacaaccctgattgcgatggctacgagatcgaacag
ggcagctaccggatcaaaggctacgaaggtccgagcctggaatgcgacaagtgtggcagc
gaaatgcagctcaagaccggccggttcggcaagttcttcggttgcaccaacgccacctgc
aagaacacccgcaaactgctgaaaagcggtgatgcggcgccgccgaagatggacccggtg
aagatgcccgaactcaagtgcgagaaggtcaacgacacctacatcctgcgcgacggggct
tccggcctgttcctggcggccagccagttcccgaagaaccgcgagacccgtgcgccgctg
gtgatcgagatcgtgccccacaaggacgagatcgatcccaagtaccacttcctctgtgaa
gcgccgaagaaggatccggatggcctgccagccgtgattcgctacagccgcaagaccaag
gagcagtacgtgcagaccgaagtcgagggcaagccaaccggttggaaggccttctacgat
ggtggcaaatgggtggttgaagacaagcgcgtagccaagtaa
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