KEGG   Pseudomonas kurunegalensis: QQ992_22305
Entry
QQ992_22305       CDS       T09327                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pkk  Pseudomonas kurunegalensis
Brite
KEGG Orthology (KO) [BR:pkk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pkk03400]
    QQ992_22305
Enzymes [BR:pkk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     QQ992_22305
    5.6.2.6  RNA 3'-5' helicase
     QQ992_22305
DNA repair and recombination proteins [BR:pkk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    QQ992_22305
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: WJD61633
LinkDB
Position
4880840..4883290
AA seq 816 aa
MPAATDLANAWFARRGWKPFAFQRRVWAAVARGESGLLHASTGAGKTYAVWLAALRAFKT
QPQGSQPAPLQVVWVTPMRALAADTARALQVPVDELALPWSVGVRSGDTGSAERARQARR
LPSVLVTTPESLTLLLTRTQAREDFATLRLVVVDEWHELLGNKRGVQLQLALAHLRHWHP
GLPTWGLSATLGNLQHARDVLLPQGGLLVQGRQDKALQVDTLLPTAIERFPWAGHIGLKM
LDQVSQEIEASASCLVFTNTRAQAELWYQALLEARPDWAGLIALHHASLARDTRDWVERS
LKQGSLKAVICTSSLDLGVDFLPVERVLQIGSAKGIARLMQRAGRSGHAPGRRSRITLVP
THSLELVEAAAARQALIAGHIEARCSPQLCMDVLVQHLVSMALGSGFRPKQLLAEVRSTW
AFRALRDSQWQWALDFVCHGGSSLSAYPDYQRVEPRPDGVYRVASERLARRHRMSIGTIV
SDANLQLKYWSKGGGGKTLGSVEEAFIARLRPGDTLVFAGRVLELVRVENMTAYVRRSTA
RKAAVARWNGGRMPLSSELADALVEQLDSAAHGRFDGPEMRTVRPLLALQAQWSALPTTG
TLLAETFKSRQGWHVFLYPFAGRLANLGLANLIAWRVSRVQPLSVSIAVNDYGFELLSPA
PVDWTTHLPKALGTEHLLEDVLASLNAGEMALRRFREIAQIAGLVFGGYPAAQKSTRQIQ
ASSGLFYEVFRKHDAGNLLLGQARDEVLGEELEIERLRRQLLKMASLKLDLQVLKRPGPL
AFALLVEGMRETLSTEKLADRIARMVAELEQAAGKA
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgcccgctgccaccgaccttgccaatgcctggtttgccaggcgtggctggaagccattc
gctttccagcgccgcgtttgggcggctgtggcgcgcggcgagtccggcctgctgcacgcc
agtaccggggccggcaaaacctacgccgtgtggctcgccgcgcttcgtgcgttcaagacc
cagccccaaggcagccaaccggcgccattgcaggtggtgtgggtgacgcccatgcgcgcc
ttggccgccgacaccgcacgcgccctgcaggtgcccgtggatgaactggcgctgccgtgg
agcgttggggtacgcagcggagacacaggcagcgccgaacgagcccgacaagctcggcgc
ctgccaagtgtgctggtcaccacacccgagagcctgacgctgctgctgacgcgtacacag
gcccgcgaagatttcgccaccctgcggctggtggtggtggatgaatggcacgaactgctg
ggtaacaagcgcggggtacaactgcagctggccttggcccacctgcgccactggcatcca
ggcctgccgacctggggcctctccgccaccctgggcaacctgcaacatgcacgggacgtt
ctgctgccgcaaggcggcctgctggtacaggggcgacaagacaaggcgctgcaagtcgat
accttgctgccaacagcgatcgagcgcttcccctgggctgggcatatcggcctgaagatg
ctcgaccaggtcagccaggaaatcgaggccagtgccagttgcctggtgttcaccaacacg
cgcgcccaggccgagctctggtaccaggccctgcttgaagcccgccctgactgggccggg
ctgattgctctgcaccatgcctcgctggcccgcgatacccgcgactgggtggaacgtagc
ctcaagcagggcagcctgaaagcggtgatctgcacctccagccttgaccttggcgtggac
tttctacccgtggaacgggtgttgcaaatcggctcggccaaaggcatcgcccgcctgatg
caacgcgccgggcgctccgggcacgcaccggggcggcgctcgcggatcaccctggtgcct
acccacagcctggaactggtggaggcagctgcagcccgacaggcactgatagccgggcac
atcgaagcccgctgctcgccgcaactgtgcatggacgtgctggtgcagcacctggtcagc
atggccttgggcagtggctttcgacccaagcagctactggccgaagtgcgcagcacctgg
gccttccgcgcgttgcgcgacagccagtggcagtgggcgctggacttcgtctgccacggc
ggcagttcactttccgcctacccggattaccagcgcgtcgagccccggcccgacggcgtt
taccgggttgccagcgaacgcctggcacggcgccaccgcatgagcatcggcaccatcgtc
agcgacgccaacctgcaactgaaatactggagcaagggcggcgggggcaagacgctgggc
agtgtcgaagaggcattcatcgcccgcctgcgtcccggcgacacgctggtgtttgccggg
cgggtgctggaactggtacgcgtggaaaacatgaccgcctatgtgcgccgcagcaccgca
cgcaaggctgcggtggcacgctggaacggtgggcgcatgccgctatcgagcgaactggcc
gacgcgctggtcgagcagctcgattctgcggcccatggccgctttgacggcccggagatg
cgaaccgtgcgcccgctgctggcgttgcaggcacagtggtcggcgttgccaaccaccggc
acgctgctggccgaaaccttcaagtcccgccagggctggcacgtgttcttgtaccccttt
gccgggcgcctggccaacctgggcctggccaacctgattgcctggcgggtcagccgcgta
caaccgctgtcggtatcgattgccgtcaacgactacgggttcgaactgctcagccctgca
ccggtggactggacaacgcacctgccaaaagcgctgggtaccgagcacttgctggaagat
gtgctggccagcctgaatgcgggggaaatggcactgcggcgttttcgcgaaattgcccag
attgccgggctggtgtttggcgggtacccggcggcacaaaagagcacccgacagatccag
gcatccagcgggctgttctatgaagtgtttcgcaagcatgacgccggtaacctgctactc
ggccaggcacgggacgaagtgctgggcgaggagctggagatcgagcggctgcgtcggcaa
ttgctgaaaatggccagcctgaagctggacctgcaggtattgaagcgaccggggccgctg
gccttcgctttgctggtagagggcatgcgcgagacgctgagtaccgagaagctggcagac
cggattgcgcgaatggttgcagaactggaacaagcggcgggcaaggcatga

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