Priestia koreensis: IE339_20750
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Entry
IE339_20750 CDS
T08027
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pks
Priestia koreensis
Brite
KEGG Orthology (KO) [BR:
pks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pks03016
]
IE339_20750 (thpR)
Enzymes [BR:
pks01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
IE339_20750 (thpR)
Transfer RNA biogenesis [BR:
pks03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
IE339_20750 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
UNL84535
LinkDB
All DBs
Position
complement(3963264..3963839)
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AA seq
191 aa
AA seq
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MTIHTHFFIAIPLPSKLQMELTEWKSSQMRQLPFKQWTHLEDYHITLSFLGEADSRTLER
LTYRLQEFAQGFSAFDLTTKHLHTFGKEETPRILWLGVEQEPLLNQLQSRVKQICDDSGF
QTDNRPYMPHVTIAKKWQGEEPFPIKEYEHKQPIFPSSFSVEAFYLYRIHMDRQPKYEAV
ETFLLGNNAAL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttgactatccatacacactttttcattgcgattccgctaccatcaaagctgcaaatggaa
ttaacagagtggaaatcgagccaaatgcgccaattgccttttaagcaatggacgcatctt
gaggattatcatattacgctttcgtttttaggagaagccgattcgagaacgttagagcgt
ttaacgtatcgtttacaggaattcgctcaaggcttttcggcttttgacttaacgacaaag
cacctgcacacatttggaaaagaggagactcctcgtatactatggcttggagtggagcag
gagccactattgaatcagttacaaagcagggtaaagcagatttgtgatgactccggtttt
caaacggataaccgaccttatatgccgcatgtaaccattgcgaaaaagtggcaaggtgaa
gagccttttccgatcaaagaatatgaacacaagcagcctatttttccttcatctttttcc
gttgaggcattttatttgtatcgtattcacatggatcgtcagcctaaatacgaagcggtg
gagacttttttacttggaaataacgccgccttataa
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