Planococcus kocurii: AUO94_09985
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Entry
AUO94_09985 CDS
T04200
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pku
Planococcus kocurii
Pathway
pku03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AUO94_09985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pku03400
]
AUO94_09985
Enzymes [BR:
pku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUO94_09985
DNA repair and recombination proteins [BR:
pku03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AUO94_09985
RecFOR pathway proteins
AUO94_09985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
NB-ARC
AAA_14
Sigma54_activat
Bac_DnaA
AAA_22
bpMoxR
MCM
RNA_helicase
Sigma54_activ_2
AAA_3
TsaE
NTPase_1
AAA_24
AAA_25
NACHT
Rad17
DUF815
AAA_17
AAA_18
Parvo_NS1
IstB_IS21
AAA_19
AAA_28
AAA_33
ATPase_2
Resolvase
AAA_PrkA
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALS78966
LinkDB
All DBs
Position
complement(327379..328377)
Genome browser
AA seq
332 aa
AA seq
DB search
MEDRIIDSEVTEFDDRFEQSLRPQYLSQYIGQHKVKHNLQIFIEAAKMRQESLDHVLLYG
PPGLGKTTLAAVIANEMEVNVKMTSGPAIERPGDLAAIVSSLEPGDVLFIDEIHRLNRAI
EEVLYPAMEDFCIDIVVGKGPTARSVRLDLPPFTLIGATTRAGALSAPLRDRFGVLSRLE
YYDTEALTEIVVRSSKLFEADIDPNAAVEIARRSRGTPRIANRLLKRVRDYAQVRGTGSI
TMDMAEQALEMLQVDPLGLDHIDHKLLTGMIERFRGGPVGLDTIAASIGEESTTIEDVYE
PYLLQIGFIQRTPRGRTVTQLAYEHFKMEMPE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccgcattatagacagtgaagtaacagagtttgatgaccgcttcgagcaatcg
ctgcgtccccaatacttgtctcagtatattgggcagcataaagtaaaacacaatttgcag
attttcattgaagctgcgaaaatgcgtcaagaaagtttggaccatgtcttgttatacggg
cctcctggacttggcaaaacgacattggctgctgttatcgccaatgaaatggaagtaaat
gtgaaaatgacgagtgggcccgcaatcgaacgccccggcgatttagcagcgattgtgtcg
tcactcgagcccggagacgtcttgtttattgacgaaatccaccggttaaaccgagcaatt
gaagaagtgttgtacccggcgatggaagacttttgtatcgatattgtcgttggtaaagga
cctactgcgagatcggtgcgtttagatttaccaccctttacgttaatcggtgcgacgaca
cgtgctggtgctttatcagctccacttcgtgaccgtttcggagtattgtctcgtcttgag
tattacgacacagaagcattgactgaaattgttgtccgtagttcgaaactgtttgaagcc
gatatcgatccgaatgcggctgttgagattgcgcgtcgatctcgtgggacaccgcgtatt
gccaaccgcttacttaagcgcgtacgtgattatgcacaagttcgtggaacgggttcgatt
acgatggacatggcggaacaagcacttgaaatgctgcaagttgacccactcggactcgat
cacattgatcataaattattaacaggcatgattgaacgctttcgcggcggtccggttgga
ctggataccatcgctgcaagtattggagaagagtcgacgaccattgaagacgtctacgaa
ccgtatttgctgcagattggttttattcaacggacaccaagaggccgcactgtcacccaa
cttgcctatgaacactttaaaatggagatgcctgaatga
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