Plantactinospora sp. BC1: C6361_05345
Help
Entry
C6361_05345 CDS
T05377
Name
(GenBank) pectate lyase
Organism
plab
Plantactinospora sp. BC1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Pectate_lyase_3
Motif
Other DBs
NCBI-ProteinID:
AVT34190
LinkDB
All DBs
Position
complement(1300144..1301325)
Genome browser
AA seq
393 aa
AA seq
DB search
MAAAPAFPGAVGFGAAVTGGRGGAVYHVTNLNDSGAGSFRDAVSQGPRIVVFDVGGYIDL
ASPLSIKSNITVAGQTAPGDGVATRGYQVSLSNADNVIVRYMRFRHGLTPNQNRDGITIN
EGSNQIFDHVSVSWGRDENFSINSSTNITVQNSIISEGLDPHSCGGLIQSDGVTLYRNLY
AHNKTRNPKVKGRNQFVNNVVYNWGSDAYIEGDSAGRSDANVIGNYFVKGPSTGSGGPFT
RGNLNFHIYAAGNYYDEDRDGTLDGRATTTADLGTVVVEPVPFAFPAVPTSSAAAAHAAV
VEQAGAALRRDAVDRRLIAELTRQTGAIITDPAAVGGFGTLVGGTVPADGDRDGMPDVWE
RSAGLNPANAADGDDYGADGYTNVERYLNSLAR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
ctggcggcggcgccggccttccccggcgcggtcgggttcggcgccgccgtgaccggtggg
cggggtggtgcggtctaccacgtgacgaacctcaacgactccggtgccggctcgttccgg
gacgcggtcagccagggcccccggatcgtggtgttcgacgtcggcgggtacatcgacctg
gcctcgccgctgagcatcaagagcaacatcaccgtggccgggcagaccgcgccgggtgac
ggcgtcgcgacccggggataccaggtgtcgctctccaacgcggacaacgtgatcgtccgc
tacatgcggttccggcacgggttgacgccgaaccagaaccgcgacggcatcaccatcaac
gagggcagcaaccagatcttcgaccacgtgtcggtgtcctgggggcgggacgagaacttc
tccatcaacagcagcacgaacatcaccgtgcagaactcgatcatttccgaagggctcgac
ccgcactcctgcggcggactgatccagagcgacggggtgaccctctaccgcaacctgtac
gcacacaacaagacccggaaccccaaggtcaagggccgcaaccagttcgtcaacaacgtc
gtctacaactggggttccgacgcgtacatcgagggggactcggccggtcgcagcgacgcc
aacgtcatcggcaactacttcgtcaagggcccgtcgaccggctccggcggcccgttcacc
cggggcaacctgaacttccacatctacgcggccggcaactactacgacgaggacagggac
ggcaccctggacggccgggccacgaccacggcagacctcggcaccgtcgtggtggagccg
gtaccgttcgcgttcccggccgtaccgacgtcctcggcggcggcggcgcacgcggcggtc
gtcgagcaggccggcgccgccctgcgccgggacgccgtcgaccgtcggctgatcgccgaa
ctgacccgccagacgggtgcgatcatcaccgaccccgccgccgtgggcgggttcgggacg
ctagtcggcggcaccgtcccggccgacggcgaccgggacggcatgccggacgtctgggag
cggtctgccgggctcaacccggcgaacgccgccgacggcgacgactacggcgcggacggt
tacaccaacgtcgagcggtacctgaacagcctggcccgctga
DBGET
integrated database retrieval system