Plantactinospora sp. BC1: C6361_11065
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Entry
C6361_11065 CDS
T05377
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C6361_11065 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plab03019
]
C6361_11065 (groL)
03110 Chaperones and folding catalysts [BR:
plab03110
]
C6361_11065 (groL)
03029 Mitochondrial biogenesis [BR:
plab03029
]
C6361_11065 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plab04147
]
C6361_11065 (groL)
Enzymes [BR:
plab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
C6361_11065 (groL)
Messenger RNA biogenesis [BR:
plab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
C6361_11065 (groL)
Chaperones and folding catalysts [BR:
plab03110
]
Heat shock proteins
HSP60 / Chaperonin
C6361_11065 (groL)
Mitochondrial biogenesis [BR:
plab03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
C6361_11065 (groL)
Exosome [BR:
plab04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
C6361_11065 (groL)
Exosomal proteins of other body fluids (saliva and urine)
C6361_11065 (groL)
Exosomal proteins of breast cancer cells
C6361_11065 (groL)
Exosomal proteins of colorectal cancer cells
C6361_11065 (groL)
Exosomal proteins of bladder cancer cells
C6361_11065 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
DUF5021
Motif
Other DBs
NCBI-ProteinID:
AVT29944
LinkDB
All DBs
Position
2616375..2617997
Genome browser
AA seq
540 aa
AA seq
DB search
MAKMIAFDEEARRGLERGMNTLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPMALKRGIE
AAVANVSEELSKLAKDVETKEQIASTASISAGDTSVGEIIAEAMDKVGKEGVITVEESNT
FGLELELTEGMRFDKGYISGYFMTDPDRMEAVLDDPYILIVNSKISTVKDLLPILEKVMQ
SGKPLAIIAEDVEGEALATLVVNKVRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGQPIS
EEVGLKLDAVGLDMLGRARKVVVTKDETTIVDGAGDADQINGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALVQA
GKTAFDKLDLAGDEATGAQIVKIALDAPLRQIAVNAGLEGGVVVEKVRNLDAGHGLNAAN
GEYVDLLQAGIIDPAKVTRSALQNASSIAALFLTTEAVVADKPEKTPAAPAAPGGGDMDF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatgatcgcgttcgacgaggaggcgcgccgcggccttgagcggggcatgaac
accctcgccgacgccgtaaaggtgacgctgggcccgaagggccgcaacgtcgtgctcgag
aagaagtggggcgcccccaccatcaccaacgatggtgtgagcatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggtgcggagctggtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcacgacgacggcgaccgtcctcgcccaggcgctggtccgt
gagggcctgcgcaacgtcgcggccggtgccaacccgatggccctgaagcggggcatcgag
gccgccgtcgcgaacgtctcggaggagctgagcaagctcgccaaggacgtcgagaccaag
gagcagatcgcctccaccgcctccatctccgccggtgacaccagcgtcggcgagatcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagagcaacacc
ttcgggctcgagcttgagctgaccgagggcatgcgcttcgacaagggctacatctcgggg
tacttcatgaccgaccccgaccggatggaggccgtgctcgacgacccgtacatcctgatc
gtcaacagcaagatctcgacggtcaaggacctgctgccgatcctcgagaaggtcatgcag
tcgggtaagccgctggccatcatcgccgaggacgtcgagggcgaggccctggcgaccctg
gtggtcaacaaggtccggggcaccttcaagtccgtcgccgtcaaggcgccgggcttcggt
gaccgccgcaaggccatgctgggcgacatcgccatcctgaccggcgggcagccgatcagc
gaggaggtcggcctcaagctggacgccgtcggcctcgacatgctgggccgggcccgcaag
gtcgtggtgaccaaggacgagaccaccatcgtcgacggtgccggcgacgccgaccagatc
aacggtcgggtcaaccagatccgcgccgagatcgagaagagcgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggcggtgttgcggtgatcaaggtcggc
gcggccaccgaggtcgagctgaaggagcgcaagcaccgcatcgaggacgcggtgcgcaac
gcgaaggccgccgtcgaggagggcatcgtccccggtggtggtgtcgcgctggtccaggcc
ggcaagaccgccttcgacaagctggacctggccggcgacgaggcgaccggcgcgcagatc
gtcaagatcgcgctggacgccccgctgcggcagatcgccgtcaacgccggcctcgagggc
ggcgtcgtggtcgagaaggtccgcaacctggacgccgggcacggcctcaacgcggccaac
ggtgagtacgtcgacctgctccaggccggcatcatcgacccggccaaggtgacccgttcg
gcgctgcagaacgcgtcgtcgatcgcggccctgttcctgaccaccgaggctgtggtggcg
gacaagccggagaagaccccggctgccccggccgcgccgggcggcggggacatggacttc
tga
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