Plantactinospora sp. BC1: C6361_24490
Help
Entry
C6361_24490 CDS
T05377
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
plab
Plantactinospora sp. BC1
Pathway
plab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C6361_24490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plab03400
]
C6361_24490
DNA repair and recombination proteins [BR:
plab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C6361_24490
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C6361_24490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
nSTAND1
AAA_23
AAA_22
APS_kinase
AAA_25
AAA_18
DnaJ_CXXCXGXG
NACHT
nSTAND3
T2SSE
DUF4350
PRK
ATPase
cobW
ScfRs
Viral_helicase1
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AVT32099
LinkDB
All DBs
Position
5596184..5599291
Genome browser
AA seq
1035 aa
AA seq
DB search
MADRLIIRGAREHNLRDVNLDLPRDAMIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARVGEPH
CPICGQKISKQSPQQIVDRVLAMEEGTRFMVLAPVVRGRKGEYVDLFAELQAKGYARARV
DGVVYPLTEPPKLKKQEKHTIEVVVDRLTVKASAKQRLTDSVEATLGLSGGLVLLDFVDL
PEDDPARERRYSEHLACPNDHPLAIEDLEPRVFSFNAPYGACPECTGLGTKKEVDADLII
PDPERTLREGAVQPWSGGQTQEYFLRLLQALGEAEHFDLDTPWRALPSRAQKTILHGSGD
QVHVRYRNKYGRERSYYTGFEGVVQWIERRHNDTESEWSRDKYEGYMRDVPCPVCRGSRL
KPEVLAVTLGGRNIAEVCALSVGECAELLGGMTLTDRQKMIAERVLKEINARLRFLVDVG
LDYLSLDRPAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRL
KGLGNTLIVVEHDEDTIRTADWIVDIGPGAGEHGGKIVHSGSVPELLSNEESVTGAYLSG
RRSIPTPKGRRPQMPGRELVVQGAREHNLRNLTVSFPLGQFIAVTGVSGSGKSTLVNDIL
YAVLANQINGARLVPGRHTRITGLEHVDKVVGVDQSPIGRTPRSNPATYTGVWDHVRKLF
AETTEAKVRGYGPGRFSFNVKGGRCEACSGDGTIKIEMNFLPDVYVPCEVCKGARYNRET
LEVHYKGRTVSDILEMPIEEAAEFFSAIPAIHRHLKTLVDVGLGYVRLGQPAPTLSGGEA
QRVKLASELQKRSTGRTVYVLDEPTTGLHFEDIRKLLGVLESLVDKGNTVIVIEHNLDVI
KTADWLVDMGPEGGHRGGLVLATGTPEELAEVPESHTGQFLRPVLGLTGPPRGASAATTR
AARANGTVKANGTARAASANGGVTRANGAGDGAVKAGNGRAVEGTVKGGAARAGTTAKAT
TAKTGTAKSRRTGKS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgactgatcatccgtggcgcgcgtgaacacaacctgcgcgacgtcaacctc
gacctgccgcgcgacgccatgatcgtcttcaccgggctctccggctccggcaaatccagc
ctggccttcgacacgatcttcgccgaggggcaacggcgttacgtggagtcgctgtcgtcg
tacgcccggcagttcctcggccagatggacaagccggacgtcgacttcatcgaagggctc
agcccggccgtctcgatcgaccagaagtccacctcccgcaacccgcgctccaccgtcggc
accatcaccgaggtctacgactacctccggctgctcttcgcccgggtcggcgagccgcac
tgcccgatctgcggccagaagatctccaagcagagcccgcagcagatcgtcgaccgggtg
ctggcgatggaggagggcacccggttcatggtgctcgccccggtggtgcgcggccgcaag
ggcgaatacgtcgacctcttcgccgagctacaggccaagggctacgcccgggcccgggtc
gacggggtggtctatccgctgaccgagccgccgaagctgaagaagcaggagaagcacacc
atcgaggtggtggtcgaccggctcaccgtcaaggcgagcgccaagcagcggctcaccgac
tcggtcgaggccacgctcgggctctccggcgggctggtgctgctcgacttcgtcgacctg
ccggaggacgacccggcccgggagcggcgctactcggagcacctggcctgccccaacgac
cacccgctggcgatcgaggacctcgaaccccgggtcttctccttcaacgccccgtacggc
gcctgccccgagtgcaccgggctcggcaccaagaaggaggtcgacgccgacctgatcatc
ccggatccggagcggaccctgcgggagggcgccgtccagccgtggtccggtgggcagacc
caggaatacttcctccggctgttgcaggcgctgggcgaggcggagcacttcgacctcgac
accccgtggcgggcgctcccgtcccgggcgcagaagaccatcctgcacggctccggcgac
caggtgcacgtccgctaccgcaacaagtacggccgcgagcgctcctactacaccggcttc
gagggcgtggtgcagtggatcgagcggcggcacaacgacaccgagtcggagtggtcccgg
gacaagtacgagggctacatgcgggacgtcccctgcccggtctgccggggcagccgactc
aagcccgaggtgctggcggtcaccctcggcggacggaacatcgccgaggtctgcgcgctc
tcggtcggcgagtgcgccgagctgctcggcgggatgaccctgaccgaccggcagaagatg
atcgccgagcgggtgctcaaggagatcaacgcccggctgcgcttcctggtcgacgtcggc
ctggactacctgtcgctggaccggccggccggcaccctctccggcggcgaggcgcagcgg
atccggctcgccacccagatcggctccggcctggtcggggtgctctacgtgctggacgag
ccgtcgatcgggctgcaccagcgggacaaccaccggctgatcgagacgctggtccggctc
aaggggctgggcaacacgctgatcgtggtggagcacgacgaggacaccatccggacggcg
gactggatcgtcgacatcggcccgggggccggcgagcacggcggcaagatcgtgcacagc
gggtccgtgccggagctgttgtcgaacgaggagtcggtgaccggggcgtacctctccggg
cgcaggtcgatcccgaccccgaaggggcggcggccgcagatgccgggccgggagctggtg
gtgcagggggcgcgcgagcacaacctgcgcaacctcaccgtctccttcccgctcggccag
ttcatcgcggtcaccggggtcagcggctccggcaagtcgaccctggtcaacgacatcctc
tacgcggtgctggccaaccagatcaacggggcccggctggtgcccggccggcacacccgg
atcaccggcctggagcacgtcgacaaggtggtcggggtcgaccagtcgccgatcgggcgc
accccgaggtcgaacccggcgacgtacaccggggtctgggaccacgtccgcaagctcttc
gccgagaccaccgaggcgaaggtccgggggtacgggccgggccggttctccttcaacgtc
aagggcggccggtgcgaggcgtgcagcggcgacggcacgatcaagatcgagatgaacttc
ctgccggacgtctacgtgccgtgcgaggtctgcaagggcgcccgctacaaccgggagacc
ctggaggtgcactacaaggggcggacggtctcggacatcctggagatgccgatcgaggag
gcggccgagttcttctcggcgatcccggccatccaccggcacctgaagaccctggtcgac
gtcggcctcgggtacgtccggctcggccagccggcgccgaccctctccggcggcgaggcg
cagcgggtcaagctcgcctccgagttgcagaagcgctccaccggccggacggtgtacgtg
ctcgacgagccgaccaccgggctgcacttcgaggacatccgcaagctgctcggggtgctg
gagagcctggtcgacaagggcaacaccgtgatcgtcatcgagcacaacctcgatgtgatc
aagaccgccgactggctggtcgacatgggcccggagggcgggcaccggggcggcctggtg
ctggccaccggtaccccggaagagctggcggaggtgccggagagccacaccggccagttc
ctccggccggtgctcgggctgaccggcccgccccggggagcgagtgccgccaccacccgg
gcggcccgggccaacggcaccgtgaaggcgaacggcaccgccagggccgcgtccgccaac
ggcggcgtgaccagggcgaacggcgccggtgacggtgccgtgaaggccggtaacggccgg
gccgtcgagggtacggtgaagggcggcgccgcccgggccggtacgacggcgaaggccacg
accgcgaagaccggtacggcgaagagccggcgcaccggaaagtcctga
DBGET
integrated database retrieval system
