Plantibacter sp. PA-3-X8: EAO79_00510
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Entry
EAO79_00510 CDS
T05731
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
plap
Plantibacter sp. PA-3-X8
Pathway
plap00521
Streptomycin biosynthesis
plap00523
Polyketide sugar unit biosynthesis
plap00525
Acarbose and validamycin biosynthesis
plap00541
O-Antigen nucleotide sugar biosynthesis
plap01100
Metabolic pathways
plap01110
Biosynthesis of secondary metabolites
plap01250
Biosynthesis of nucleotide sugars
Module
plap_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
plap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EAO79_00510 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EAO79_00510 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EAO79_00510 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EAO79_00510 (rfbB)
00525 Acarbose and validamycin biosynthesis
EAO79_00510 (rfbB)
Enzymes [BR:
plap01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EAO79_00510 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
Sacchrp_dh_NADP
NmrA
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AZH81543
UniProt:
A0A3G8VEM6
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All DBs
Position
107788..108786
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AA seq
332 aa
AA seq
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MSRLLVTGGAGFIGSNFVHYVLNNTDHSVTVLDKMTYAGNRASLDGLPADRFELVVGDIQ
DATLVDELVARHDAVVHYAAESHNDNSLHDPRPFLDTNIIGTYTLLEAARKHGTRFHHIS
TDEVYGDLELDDPERFTEQTPYNPSSPYSSTKAGSDLLVRAWVRSFGVKATISNCSNNYG
PYQHVEKFIPRQITNVLGGERPKLYGTGENVRDWIHANDHSSAVLTILDKGVIGETYLIG
ADGEKNNKDVVELILTQLGQPADAYDHVNDRPGHDLRYAIDSSKLRTELGWTPAFSDFEA
GLADTIAWYRDNESWWKPQKAATEAKYQEQGQ
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagacttctcgttaccggcggcgccggattcatcggctcgaacttcgtccactac
gtcctgaacaacaccgatcactcggtgaccgtcctcgacaagatgacctacgcgggcaac
cgcgcctcactcgacggcctcccggccgatcgtttcgagctcgtcgtcggcgacatccag
gacgcgacgctcgtcgacgagctcgtcgcccgtcacgacgccgtcgtgcactacgcggcg
gagtcgcacaacgacaactccctccacgacccgcgcccgttcctcgacacgaacatcatc
ggcacgtacacgctgctcgaggcggctcgcaagcacggcacgcggttccaccacatctcg
accgacgaggtctacggcgacctcgagctcgacgacccggagcgcttcaccgagcagacg
ccgtacaacccgtcgagcccgtactcctcgacgaaggccggcagcgacctcctcgtccgc
gcgtgggtgcggtccttcggcgtcaaggcgacgatctcgaactgctccaacaactacggt
ccgtaccagcacgtggagaagttcatcccgcgccagatcacgaacgtgctcggcggtgag
cgaccgaagctgtacggcacgggcgagaacgtccgcgactggatccacgcgaacgaccac
tcgtccgccgtcctcacgatcctcgacaagggggtcatcggcgagacgtacctcatcggt
gccgatggcgagaagaacaacaaggacgtcgtcgagctcatcctcacccagctcggtcag
ccggcggacgcctacgaccacgtgaacgaccgtcccggccatgacctccgctacgcgatc
gactcgtcgaagctgcgcacggagctcggctggaccccggcgttcagtgatttcgaggcc
ggcctcgccgacacgatcgcctggtaccgcgacaacgagtcgtggtggaagccgcagaag
gccgccaccgaggcgaagtaccaggagcagggtcagtaa
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