Palleronia sp. LCG004: RVY76_05550
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Entry
RVY76_05550 CDS
T09465
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
plcg
Palleronia sp. LCG004
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plcg03009
]
RVY76_05550
Enzymes [BR:
plcg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
RVY76_05550
Ribosome biogenesis [BR:
plcg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RVY76_05550
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Methyltransf_25
Methyltransf_15
Methyltransf_31
MTS
Motif
Other DBs
NCBI-ProteinID:
WOI57249
LinkDB
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Position
complement(1150659..1151849)
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AA seq
396 aa
AA seq
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MRVDLHVMTPAARVQTAIECLDAIIAGQAAEQVLTRWARGARHAGSKDRAAIRDLVFDVL
RRWWSSAARGQGESGRARMIGYLAEEGADLPSIFSGAGYGPAALQPAERETAEPHGLAAL
DCPAEFETDLRTSLGSDFNGVLSNLRHRAPVFLRVNLRKASVQDTMDRLAGEGITTRPSG
LSPTAIEVTERPRAVARSAPYLDGTVELQDAASQAVVDFLPLDGARRILDYCAGGGGKTL
AMAARHDALYHAHDIDRRRLEALVPRAKRAETSIGLRDAADLEAEKPYDLVLVDAPCSGS
GAWRRSPEGKVRLDRARFDELRNLQSDILTRAAAHVAPGGVLCYATCSLMDAENGAQVED
FICKNTGFSRHCERRWTPLDGADGFFVSVLFRDKTA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcgatcttcacgtcatgacgcctgctgcgcgggttcagacggcaatcgaatgt
ctcgatgcgattatcgcggggcaggccgccgaacaggtcctgacccggtgggcaaggggc
gcacggcatgcgggctccaaggaccgcgccgcgatccgcgatctagtcttcgacgtgctg
cgtcgctggtggtcgagtgccgcacgcggtcagggagagtcgggccgggcgcgcatgatc
ggctatcttgcggaggagggggcggatctcccgtcgatcttctccggtgcgggctacggg
cccgcggcccttcaaccggccgaacgcgagaccgccgaaccgcacggtctcgccgcgctc
gattgcccggcggagttcgagaccgatctcaggaccagcctcggttcggatttcaacgga
gtgctttccaaccttcgccaccgggcgccggttttcctgcgcgtcaatctgcgcaaggca
agcgttcaggacacgatggaccgcctcgcgggcgaagggatcacgacaaggccctccgga
ctgtcgccgacggcgatcgaggtgaccgaacggcctcgcgccgtcgcgcgatccgcgcct
tatctcgacggcacggtcgagcttcaggatgccgcgtcgcaggccgtagttgatttcctg
ccgctcgatggcgcccgaaggattctcgattattgcgctggcggcggtggcaagacgctc
gccatggcggcgcgtcacgacgcgctctatcatgcccacgacattgatcgcaggcggctc
gaggcgctggtcccgcgagcaaaacgcgcggaaacttcgatcggattgcgggatgcggcc
gatctcgaggcggagaaaccctacgatctcgtcctcgtcgatgcgccctgttcgggctcg
ggcgcctggagacggagccccgagggcaaggtgcggctcgaccgcgcgcgcttcgacgag
ttgcgcaacctgcaatcggacatcctgacccgtgcggcggcacatgtcgcgccgggtggg
gtgctctgttacgcgacatgctctctcatggatgccgagaacggggcacaggtcgaggat
ttcatttgcaaaaacaccggcttctcccgccattgcgagcggcgctggacgcccctcgac
ggggcagacggcttcttcgtatctgttctcttccgcgacaaaaccgcataa
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