Palleronia sp. LCG004: RVY76_10810
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Entry
RVY76_10810 CDS
T09465
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
plcg
Palleronia sp. LCG004
Pathway
plcg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RVY76_10810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plcg03400
]
RVY76_10810
Enzymes [BR:
plcg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RVY76_10810
DNA repair and recombination proteins [BR:
plcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RVY76_10810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
CBM_26
Motif
Other DBs
NCBI-ProteinID:
WOI55531
LinkDB
All DBs
Position
complement(2213602..2214384)
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AA seq
260 aa
AA seq
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MPFTIATWNINSVRLRAGLVSDFLAAEGPDILCLQECKSPVDKIPSFEADGYPHIVARGQ
KGYNGVAILSKRPIEEVGAFDHASLGHARHVAARLENGIVIHNHYVPAGGDVPDREVNVK
FGQKLDYLTEMRDDFRATRPERSILVGDLNIAPREDDVWSHKQLLKVVSHTPVEVAQLGE
TQEAGAWVDVVRQDIPEGQLYSWWSYRSPDWDTADKGRRLDHIWATPDIAGAAHSARVLR
HVRGWEKPSDHAPVLMTFDL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcaccatcgccacctggaacatcaattccgtgcgccttcgcgcggggctcgtc
tcggatttcctggccgcagaggggcccgacatcctttgtctgcaggagtgcaaatccccg
gtcgacaagattccctcgttcgaggccgacggttacccccatatcgtcgcgcggggtcag
aagggctacaacggcgtcgcgatcctgtcgaaacgtccgatcgaggaagtgggggctttc
gatcacgcctcgctgggccatgcgcgccatgtggccgcgcggctggaaaatggcatcgtg
atccataaccattacgtgcccgcgggcggcgacgttcccgaccgcgaggtgaacgtgaag
ttcgggcagaagctcgattacttgaccgagatgcgcgacgatttccgcgcaacccgcccg
gaacgttcgatcctggtgggtgatttgaacattgccccgcgcgaagacgacgtctggtcg
cacaaacagcttctgaaagtcgtgtcgcacactccggtcgaggtcgcccagctgggcgag
acgcaggaagccggagcctgggtggacgtcgtgcggcaggatattcccgaggggcagctc
tattcgtggtggtcctatcgttcgcccgactgggacacggccgacaagggccgcaggctc
gaccatatctgggccacgcccgatatcgcaggggcggcccattcggcacgggtcctgcgc
catgtccgcggctgggagaagccttcggaccatgcgccggtcctgatgaccttcgacctc
tag
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