Paenibacillus lentus: EIM92_13105
Help
Entry
EIM92_13105 CDS
T05914
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
plen
Paenibacillus lentus
Pathway
plen03022
Basal transcription factors
plen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EIM92_13105
09124 Replication and repair
03420 Nucleotide excision repair
EIM92_13105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plen03021
]
EIM92_13105
03400 DNA repair and recombination proteins [BR:
plen03400
]
EIM92_13105
Enzymes [BR:
plen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EIM92_13105
Transcription machinery [BR:
plen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EIM92_13105
DNA repair and recombination proteins [BR:
plen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EIM92_13105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
AAA_22
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AZK46975
UniProt:
A0A3S8RUW5
LinkDB
All DBs
Position
2942604..2944334
Genome browser
AA seq
576 aa
AA seq
DB search
MDGTGACIVQRDFTVLLEKEHPGFEQAKLQLARFAELVKSPALFHTYRITPLSLWNAAAS
GWTADDVVERLRNLARWEVPGKVVSDIRTWISRYGSLALVKSQDAPNTFCLKIRGTDPSL
LRQLEKEPALTPFRLERDGSRLHFPAVFRGLLKQEMARLGYPIIDEAGYHSGHTLSLALR
SVLPNGQPFALRDYQVEGVQAFAGSITSDGYQGNGGSGVIVLPCGAGKTVIGIAALERLQ
CETLILTSNVTSVRQWIAEICQKTTLAREEVGEYSGDMKQVRPVTVSTYQILTHRHRKEE
EFRHMSLFNERDWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGCERDVFSL
IGPKLYEVPWRDLEKCGYIAKVECQEIQVAMSPSLREEYEAAQGRDKFRIAAENPRKIVW
LQKLLRLHEDRQVLIIGQYLQQLTQVAGVLHAPLITGSTPQEERVRLFQGFRERRFQVLV
VSKVANFAVDLPDASVAVQISGSFGSRQEEAQRLGRILRPKATGDVAYFYSLVSVDSREQ
HFALRRQLFLVEQGYEYSIRPDDVSCLDAVSRREVL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggatggaacgggagcgtgtatcgtgcagcgtgattttaccgtgctgctggaaaaggag
catcctggttttgaacaagccaaattgcagctggctcgtttcgcagagctggtcaagagc
ccggctttgtttcatacataccgaattacgccgctttcgctgtggaatgcggctgcaagt
ggatggactgcggatgatgtggtggagcggctgcgaaatttggcgagatgggaggtgcct
ggcaaggtggtctcggatatacgcacctggatatcccgctatggttcgctagctctggtt
aaatctcaggatgcgccgaatacgttctgtcttaaaatccgtggcacggatccatcgctg
ctccggcagttggagaaggagcccgccctaactccgtttagactggagcgggatggcagc
aggctgcactttccggctgtattccgcggtctgctcaagcaagaaatggcccggcttggt
tacccgatcatcgatgaggcgggttaccatagtggacacactctgtcgcttgcccttcga
tcagtgcttcccaacggtcaaccatttgccctaagagattatcaagtggaaggggttcag
gcgtttgcaggatcgataacttcggacggataccaaggtaacgggggcagtggagttatt
gtactaccgtgcggagccgggaagacggtcattggaatcgctgcgcttgaacgcctgcag
tgcgagacactgatcttaacctcgaacgtcacttctgtgcggcaatggatcgccgaaata
tgccagaagacaacgttagcacgtgaggaagtcggggagtattctggagacatgaaacag
gtacggcctgtcacggtgtcgacctatcagattttgacccatcggcataggaaagaggaa
gagttcaggcatatgagcttgtttaacgagagggattggggactgattatttacgatgag
gttcatttactcccggcgcccgtatttcgtgctacggcagacattcaggcgacgaggcgc
cttggattgacggcaacgctcgttcgggaggacgggtgcgagcgagacgtattctcgctc
atcgggccgaaactgtatgaggttccctggcgcgacctggagaaatgcggctatatcgct
aaggttgaatgccaggaaattcaggtcgcgatgtctccttcccttagagaggaatatgaa
gccgcccaaggacgcgataagtttcgaatagcggcagaaaatccccgaaaaatagtctgg
ctacaaaaattgcttcgtctgcatgaagaccggcaagttttaatcatcggccaatatttg
cagcagctgacccaggtggccggagttctgcatgctccgctgattaccggaagcacgcca
caggaggagcgagtccggttgtttcagggttttcgcgaacggcgatttcaagtgctcgtc
gtgtctaaggttgctaactttgcggtggatctcccggatgcatccgtggctgtgcaaata
tcgggcagcttcggctcaaggcaggaggaggcgcagcgactaggtcggatattgcgcccg
aaagcaacgggagatgtcgcgtatttctatagtttagtatcagtggacagcagggagcag
cactttgctttgcgtcggcagctgtttctcgtagagcagggatatgaatactctatccgc
cccgatgacgtatcctgcttagatgctgtctcccggagggaggtgctttga
DBGET
integrated database retrieval system
