Paenibacillus lentus: EIM92_17490
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Entry
EIM92_17490 CDS
T05914
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
plen
Paenibacillus lentus
Brite
KEGG Orthology (KO) [BR:
plen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plen03009
]
EIM92_17490 (rimO)
Enzymes [BR:
plen01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EIM92_17490 (rimO)
Ribosome biogenesis [BR:
plen03009
]
Prokaryotic type
ribosomal protein modification factors
EIM92_17490 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
PDEase_I_N
Motif
Other DBs
NCBI-ProteinID:
AZK47726
UniProt:
A0A3Q8SCW6
LinkDB
All DBs
Position
complement(3886935..3888263)
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AA seq
442 aa
AA seq
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MTEKVKIVTLGCEKNLVDSEIMSGLIDQRGYRLVEDRGEATVIIVNTCGFIDAAKEESVN
TILDLADLKETANLKALIVSGCLTQRYKQALMEEMPEIDGIVGTGDFYNIAQIVDEALKG
KKPIQVGNPVFNYEEVLPRKVSTAKYTTYVKIAEGCDNNCTFCSIPIMRGKFRSRSMESI
VAEGKLMASQGVKEISLIAQDSTNYGTDLYGEYKLAELMDQVTKVNGIEWVRLHYAYPGF
FTDELIEMIATNPKICKYVDMPLQHSEDALLKRMRRPGRNRDIRELIAKIRSRIPNVSLR
TSLIVGFPGETEDDFARLCDFVREIKFDRLGVFTYSKEEDTPASRLPDQIPDEVKEWRAT
TLMEIQREVSNENASKFVGQVLDVLVERYDGRSDVYIGRSQFDAPEIDGEVYVTNCPVGI
GEMAKVRITHAYEYDLSGEGVL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaagtgaaaatcgttacacttggttgtgagaaaaacctggttgactcggaa
attatgtcaggactaatcgatcagagaggctatcgtcttgtggaggatcgtggagaggcg
acggttattatcgttaacacctgtggatttattgatgctgccaaagaagaatcagtgaat
acgattctcgatttagctgatttaaaagagacagcgaacctgaaggcgctcattgtatcc
ggttgtctgactcagcgctacaagcaggccctaatggaagaaatgccggagatcgacggt
attgtcggaaccggggatttttataatattgctcagatcgtggacgaagccctgaaaggt
aagaaaccgattcaagtcgggaatcctgtgtttaattatgaggaggttctccctcgtaaa
gtatcgacagctaagtatactacatatgtaaaaatcgcggagggctgcgataataactgt
actttttgcagcattccgataatgcgcgggaagtttcgcagtcgttcgatggaatcgatt
gtggctgagggcaagcttatggcgtcgcaaggggtaaaggagatcagtctgatcgcacag
gactcgacgaattacggaacggatctttatggtgaatataagctcgctgaattgatggat
caggttacaaaggttaacggtatcgaatgggtacgactgcactatgcatacccgggcttc
ttcacggatgaattaattgagatgattgcaacgaatccaaagatatgtaaatatgttgac
atgccgctgcagcatagtgaggatgctctgctcaaacggatgcgcagaccggggcggaat
cgtgacatccgcgagctgattgccaaaatacgttcccgtattccgaatgtttcgctccga
acttcccttatcgtcggatttccgggtgagacagaagatgattttgctcgtctatgcgat
ttcgtaagagagatcaagtttgaccgtttaggcgtatttacctattcaaaggaagaagat
acgccggcgtcaaggctgccggatcaaattccagatgaggtgaaggaatggcgtgccacg
acgctgatggaaattcagcgagaggtctctaatgagaatgccagtaaattcgtgggacaa
gtcctggacgtgcttgtggagcgttatgatggacgtagcgacgtctatattgggcgttcg
caatttgatgcgcccgaaattgatggtgaagtgtatgtaacaaactgtcccgtcggcatc
ggcgagatggctaaagtgcggattacgcatgcttatgaatatgatttgtccggggagggt
gtcctttga
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