Peromyscus leucopus (white-footed mouse): 114693015
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Entry
114693015 CDS
T07241
Symbol
Tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
pleu
Peromyscus leucopus (white-footed mouse)
Brite
KEGG Orthology (KO) [BR:
pleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pleu03036
]
114693015 (Tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pleu04812
]
114693015 (Tubgcp6)
Chromosome and associated proteins [BR:
pleu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
114693015 (Tubgcp6)
Cytoskeleton proteins [BR:
pleu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
114693015 (Tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
APOBEC2
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
114693015
NCBI-ProteinID:
XP_028724975
LinkDB
All DBs
Position
20:15252868..15275386
Genome browser
AA seq
1800 aa
AA seq
DB search
MASITQLFDDLCEALLPAAQARPGQRSVNRKRAKLSLKRVAYNALFANLFQEETHQRQPD
SSKLPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLEATPGCPLVEVESVLDLLVQLAGS
GPPQVLRRKRDYFFNNKHAGRNVPYSGYDCYDLSVFEMDVRSLISGEEYLCHNMVHEAVQ
VMEAAPGTGLPTVGLFSAGDSCGDRFERDTRVSLFGALVHSRTCDMDVRLDLPPVPDSAD
FSGLAIKVPQIVDQWEDEGFQSASNLTPDSQSEPSMTPDLDLWEAVLTYEASKRRCWERI
GCPPGHREEPYLTEAGRDAFDRFCRLCHGELQALSGGLLQAPKPVLVEESELVKDSLNVL
LGVVSATFSLCQPTQAFVVELGVHVSGASPESISSILSEVAEYGTYYTRLSHFSLQPVVG
SSCSRGLVFQAFTSGLRRYLQYYRACVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVG
TVSLATSGEPRPVFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWVY
SGVFRDVYGEFMIQVNHEYLSFRDKFYWTHGYVLISKEVEDCVPVFLKHIAHDVYVCGKT
INLLKLCCPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMERVARHSSISKEEK
ELRMEIAKQELIVHAREAASRVLRELSDRQMSEQMAVDTRKREQFQRLKEQFVKDQERRL
AARQEELDDDFSYARELRDREKRLKALEEELERKARQALVDHYSKLSAEAARREQKALWR
IQRHRLESARLRFLLEDQKSIQEMLRDMEAHPPQEPLSVFPSTCPQVPSPGPEHADEGRS
CDLGSAELRWDHPSPPSASTPSALQSAAEGVDDPGAGQAEGAGPFSPGLSITDFLPVGPG
AEQPVDNTGAPFLEVALQTISSDLSPVTPGPALTAAGPQPTQSEYDFDTILRPAVATSSS
PGPLQDVQNGLDSEKQHLLGDMPTKLDACVHDTQETLPCPHPLKHVTSEEGTFQPVGQLL
EHISGTAVSAESLASGMAPCQPLSISGCVSDASIKQGDYMSDVALPQPQWNIHGHLSDAS
TGAGENVSEVAPSRPRWNVHGHVSDASIKIGENVSDVAPSRPRWNIHGHVSDASIKVGEN
VSEVAPSRPRWNVHGHVSEASIRIGENVSEVAPSRPRWNVHGHVSEASIRIGENVSDVAP
SRPRWNIHGHVSDANIRIGENVSDVTPSRPRWNVHGHVSDASIRIGDSVSEEALQPHGCP
QPPLILEEPLPEAEPDLLTPQQCPPACVSPSGLHVEAQSPVGESGSQLPGETKPTLWSSL
GSTEEGSVQTKPPVVAEPSTLGNGIPEETGPGRRRDAEDLSPWPPSSQEDTAVPSSPGPS
EEVSDTEAEARRWGKEQAYLADLTKLYHLEQYPDSYESMSEPPVAHLVHHMLPQAFAFPV
DPQVQSAVDETAVQLSELLTLPVLMKRSLTAPLAAHVSLVNKAAVDYFFVELHLETHFEA
LRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPLVLNSILSKALQYSLHGDTPHAAN
LSFALKYLPEVFAPNAPDVLSCLELRYKVDWPLNIVITESCLNKYSGIFSFLLQLKLMMW
TLKDICFHLKRTALVSHTAGSVQFRQLQLFKHEMQHFVKVIQGYIANQILHVSWCEFRAR
LAVVGDLEEIQRAHAEYLHRAVFRGLLTEKAAPVMNIIHSIFSLVLKFRSQLISQSWGPA
TGPRGAEHPNFPLMQQSYSTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYQDS
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atggccagtatcacccagctgttcgatgacctctgcgaggctctcttacctgctgcccag
gctcgcccgggccagcgcagcgtgaataggaagagggcaaagctgagccttaagagggta
gcctacaatgctcttttcgccaatcttttccaagaggagactcatcagcggcagcccgac
tcgtcgaagctcccagtgaaaaacaaggtcctcatgctgtcctttgatttgagggtgggc
ggcttggggccagaggccgaccgtttggaggagcttgtggagaagttggaagcaacccct
ggctgtcctcttgtggaggtggagtcggtgctggacctcttggttcagctggcagggagc
ggccctcctcaagtgctgcggagaaaacgggattacttctttaacaacaagcacgcaggc
agaaacgtaccctacagcggctacgattgctatgacctgagtgtgtttgaaatggacgtt
cggtcgcttatctccggagaggagtatttgtgtcataacatggtccatgaagcagttcaa
gtgatggaggctgccccaggcactggcctgcccaccgttgggctcttctcagcgggtgac
tcttgtggtgacaggtttgagagagacacccgggtctcactctttggtgccctcgtgcac
agccgcacatgtgacatggatgtgcgtctggatctgccccctgtgccggacagcgcagac
ttttccgggctggccattaaggtcccacagattgtggatcaatgggaagatgaagggttc
caatcagcttccaatttaactcctgactcccagtctgaaccaagcatgaccccggacttg
gacctgtgggaagctgtgctcacatatgaagccagcaagcggaggtgctgggagcgcatt
ggatgcccccctggtcaccgagaggagccctacctcaccgaggcagggagggatgccttt
gacaggttctgcaggctctgtcatggagagctacaggccctcagtgggggtctactacag
gcccccaagcctgtgctggtggaggaaagcgagctggtgaaagactcactgaatgtcctg
ctgggtgtggtgtctgctacattttctctttgtcagccaacacaagcctttgtagtggag
ttgggtgtccatgtgtcaggcgcatctcctgagagcatcagcagcatcctttccgaagtg
gcggagtacggaacctactacacacgcctgagccatttctctctacagcctgtcgtaggc
tcctcgtgcagcaggggccttgtattccaggccttcaccagcggcctgcggaggtacttg
cagtattaccgggcctgtgttctctccaccccgcctaccctgagtctcctcaccattggc
tttctcttcaagaaactgggccggcagctcaggtacttggctgagctttgtggtgttggc
actgtatccctggcaaccagtggagaacccaggcctgtcttccccactggagtgaagctt
ctgtcctacctctaccaggaggcactggataactgtagtaacgagcactatcctgtgttg
ctgtccctgctgaagaccagctgtgagccctacacacggttcatccatgattgggtgtac
agtggagtcttcagagatgtttatggggagttcatgatccaagttaaccatgagtacctc
agcttccgagacaagttttactggacccatggctacgtgctcatttccaaagaggtggag
gactgtgttcccgtgttcttgaaacatatcgcccacgatgtgtacgtctgtgggaagacc
atcaacctgctgaagctctgctgcccccggcactatctctgttggtctgatgtccccgtc
cctcgtatctcggtgatcttctctctcgaggagctgaaggagatcgagaaggactgtgct
gtctacgttgggcggatggagagagttgcccgtcatagctccatcagcaaggaggaaaag
gaattgcgtatggaaattgcaaaacaagaactaattgtccatgcccgggaagcagcatct
cgggttctgagagagctgagtgaccggcagatgtcagaacagatggctgtggacaccagg
aagcgagagcagtttcagcggctgaaggaacagtttgtgaaggatcaggagcgacgcctg
gcggctagacaagaggagctagatgatgatttcagctatgcccgtgagctccgtgaccgg
gagaagaggctcaaggccctggaggaagagctggagaggaaggccaggcaggcactggtt
gaccattacagcaagttgtctgcagaggcagctcgccgagagcagaaggctctgtggaga
atccagaggcaccggctagagagcgcacgcctccgtttcctcctggaagaccagaagagc
attcaggagatgctgagagacatggaggctcacccgccccaggagccgctgagcgtgttc
ccaagcacatgccctcaggtcccatctccaggtcctgagcatgcagatgaaggccgtagc
tgtgatctggggtctgcagaactgcgttgggatcatccaagtccaccaagtgcatcaaca
ccatcagccctccagtctgcggcagagggagtggatgaccctggtgctgggcaggcagag
ggagctgggcccttctctcctggtctcagcatcacagactttctgcccgtgggccctggg
gccgagcagcctgtggataacactggagctcccttcttagaggtggcactgcagaccatc
tcttcagacctgtcccctgtaactcctgggccagcactcacagcagctggcccccagcct
acccagtcagagtatgatttcgataccatcctgaggccggctgtggccacctcctcttca
ccaggacccttgcaggatgtccaaaatggtttggacagtgaaaagcagcatctattgggg
gacatgcccacaaaactggatgcatgtgtccatgacacgcaagagactttgccttgccca
catccactcaagcatgtcacttctgaggaggggaccttccagcctgtggggcagctcctt
gaacacatatcagggactgctgtctctgcagagagccttgcttctggaatggctccttgc
cagccacttagcatttccggatgcgtgtcagatgccagcatcaagcagggggactatatg
tcagacgtggctcttcctcagccacagtggaacatccatggacatttgtcagatgccagc
actggagctggggagaatgtgtcagaagtggctccttctaggccacggtggaatgtccac
ggacatgtgtcagatgccagcatcaagattggggagaatgtgtcagatgtggctccttcc
cggccacggtggaacattcatggtcatgtgtcagatgccagcatcaaggttggggagaat
gtgtcagaagtggctccttccaggccacggtggaatgtccacggacatgtgtcagaggcc
agcatcaggattggggagaatgtgtcagaagtggctccttccaggccacggtggaatgtc
cacggacatgtgtcagaggccagcatcaggattggggaaaatgtgtcagatgtagctcct
tcccggccacggtggaacattcatggacacgtgtcagatgccaacatcaggattggggaa
aatgtgtcagatgtgactccttctcggccacggtggaatgtccatggacacgtgtcagat
gccagcatcaggattggggacagtgtgtcagaagaggctcttcagccacatggatgtcct
cagcctcccttgattctggaggagcccttgccagaagctgagcctgacctcctcacgccc
cagcagtgccctcctgcctgtgtgtccccgtcaggccttcatgtggaagcacagagccct
gttggggaaagcgggtcacagctgcctggcgaaacgaagcccaccctctggtctagcctt
ggcagcacagaagaaggtagcgtacagaccaagccccccgttgtggctgagcctagcacg
ctgggaaatggcatccctgaagagacaggtccagggaggaggagggatgcagaagacctc
tctccatggcctccaagctcacaggaagacacagcggtcccaagcagcccaggccctagt
gaggaggtctcggacacggaggctgaggccagacgctggggcaaggagcaagcctatttg
gcagacctcacaaagctctaccacctggagcagtaccccgacagctacgaatccatgtca
gagcctcctgtggctcacctggtccatcacatgcttccccaggcctttgctttccccgtg
gacccccaagttcagtcagcggtggatgagactgcagtgcagctaagtgagctgctgacg
ctgcctgtgcttatgaagcgctcgctcacggcacctctggctgcccatgtcagcctggtg
aacaaagctgcggtcgactatttctttgtggagctgcacctggagacacattttgaagca
ctgcgccatttcctgctgatggaagatggagagttcgcgcagtcccttagtgacctgctc
tttgagaagctcggggctggacagacgcctggggagctgctcaacccactggtccttaac
agcatcctgagcaaggcactgcagtatagcctccatggggacacgccacatgctgccaac
ctgtcttttgccctcaagtacctgcctgaggtgtttgcccctaatgcgccggatgtgctg
agctgcctggagctcaggtacaaggttgactggcccctcaacatcgttatcaccgagagc
tgcctgaacaagtacagcgggatcttctccttcctgttgcagctgaagctcatgatgtgg
acactcaaagacatctgcttccacctcaagcgcacagccctggtgagccacacagctggc
tcagtgcagttccgccagctgcagctgtttaagcacgagatgcagcatttcgtgaaggtc
atccagggctacattgctaaccagatcctgcatgtcagctggtgcgaattcagggcccgg
ctagctgtagtaggtgacctggaggagatccagcgggcccatgccgagtacctgcacagg
gctgttttcaggggcctgctgaccgagaaggcggcaccagtcatgaacatcatccatagc
atcttcagcctggtgctcaagttccgtagccagctcatatcccagagctggggcccggct
actggcccccgtggtgccgagcaccccaacttcccactcatgcagcagtcctacagcacc
ttcaagtactactcccacttcctcttcaaagtagtgaccaagcttgtgaaccgtggctac
cagccccaccttgaggacttcctgcttcgaatcaacttcaacaactactaccaggactcc
tga
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