Pantoea ananatis LMG 5342: PANA5342_0944
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Entry
PANA5342_0944 CDS
T01728
Symbol
yqcB
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plf03016
]
PANA5342_0944 (yqcB)
Enzymes [BR:
plf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
PANA5342_0944 (yqcB)
Transfer RNA biogenesis [BR:
plf03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
PANA5342_0944 (yqcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
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GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CCF08337
LinkDB
All DBs
Position
969512..970291
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AA seq
259 aa
AA seq
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MLEIIYQDAWLVAVNKPAGWLVHRSWLDRHETQFVMQTVRDQIGQHVFTAHRLDRPTSGV
LLMGLSSEVGRLLSQQFEHHQMEKTYHAVVRGWLEGRDRLDYPLVEELDKIADKFVSDPR
APQPAVTDYASLATVEMPVAVSRYPTARYSLIELKPKTGRKHQLRRHMSHLRHPIIGDSA
HGDLRQNRGAAAHFGANRLMLHASSLSLSHPVTGEPLVIRAGLDLVWQRVMDQFGWQACM
PDVPRVEFMAGSGQDSGTE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgttagagatcatttatcaggatgcgtggctggtggcggtgaacaaacccgccggttgg
ctggtccaccgtagctggcttgatcgccatgaaacgcagtttgtcatgcagacggtacgc
gaccagataggccagcatgttttcacggcgcaccggcttgatcgccccacatcgggcgtt
ctgctaatgggcctgtccagtgaggtgggccgcctgctttcccagcagtttgagcatcat
cagatggagaagacctatcatgccgtggtgcgcggctggctggaaggccgcgatcggctg
gattatccgcttgtcgaagagctggataaaattgccgacaaatttgtcagcgacccccgc
gcgcctcagcctgcggtgaccgattacgcctcactggccaccgtagagatgccggtcgca
gtgagtcgttatcccactgcgcgttacagcctgattgagctcaaacccaaaaccggacgc
aagcatcagctgcgtcggcatatgtctcatcttcgccatcccattatcggcgattcggcc
catggcgatttgcgtcagaatcggggggcggctgcacactttggcgcaaatcgtttaatg
ttgcatgccagcagcttgtcgctcagccacccggtgacgggagaacccctggttattcgc
gccggacttgatcttgtctggcaacgggtgatggatcagtttggctggcaggcctgtatg
ccggatgtgccacgggttgagtttatggctggctcaggtcaggatagcgggacggaataa
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