Pantoea ananatis LMG 5342: PANA5342_3118
Help
Entry
PANA5342_3118 CDS
T01728
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase cytochrome b-556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
plf
Pantoea ananatis LMG 5342
Pathway
plf00020
Citrate cycle (TCA cycle)
plf00190
Oxidative phosphorylation
plf00650
Butanoate metabolism
plf01100
Metabolic pathways
plf01110
Biosynthesis of secondary metabolites
plf01120
Microbial metabolism in diverse environments
plf01200
Carbon metabolism
Module
plf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
plf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
plf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PANA5342_3118 (sdhC)
00650 Butanoate metabolism
PANA5342_3118 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
PANA5342_3118 (sdhC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
Fumarate_red_D
Motif
Other DBs
NCBI-ProteinID:
CCF10511
LinkDB
All DBs
Position
complement(3260374..3260796)
Genome browser
AA seq
140 aa
AA seq
DB search
MSGGSKIKKSCVGKTVKKQRPVNLDLSTIRFPVTAISSILHRVSGVITLVALGILLWLLG
LSLSSPEGFQHAASVMNGFFAKFIMWGILTALAYHAVGGIRHMLMDFGYLAETLEAGKRS
AQVTFGITVVLSILAGVLVW
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaggaagcaaaataaaaaagagctgtgtgggcaaaaccgtgaaaaaacaaaga
cctgtcaacttggatctctcgacgatccggtttcccgttactgcaatatcgtccattctt
caccgcgtctccggcgtcatcaccctggttgctctcggcatcctgttatggcttctcggt
ctttccctctcttctcctgaaggtttccagcacgctgcatctgtcatgaatggcttcttt
gcgaagttcatcatgtggggcattttgactgcgctggcctatcatgcagtgggcgggata
cgtcatatgttaatggattttggttatctggccgaaacgctcgaagcaggtaagcgttct
gcgcaggtgacgtttggtattactgtcgtgctttcaattttagcaggagtcctcgtatgg
taa
DBGET
integrated database retrieval system
