Pantoea ananatis LMG 5342: PANA5342_4096
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Entry
PANA5342_4096 CDS
T01728
Name
(GenBank) ROK family protein
KO
K02565
N-acetylglucosamine repressor
Organism
plf
Pantoea ananatis LMG 5342
Brite
KEGG Orthology (KO) [BR:
plf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plf03000
]
PANA5342_4096
Transcription factors [BR:
plf03000
]
Prokaryotic type
Other transcription factors
Others
PANA5342_4096
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ROK
MarR_2
HTH_24
MarR
HTH_IclR
TrmB
HTH_Crp_2
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
CCF11489
LinkDB
All DBs
Position
complement(4318690..4319808)
Genome browser
AA seq
372 aa
AA seq
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MIAPNVTARILRLIVEHAPVSQSDLKVRSGLSMSTVSQATNRLLAQGIVQELGLRRVSMG
RPKTLLGLNPDRASVIGIQLNAERNLIVMTDLSGNLLGEQQMPSGAITPRQLGDALAKFL
RGVEEKQVGAIGLALSGLVDAENGYCIRSKVLDWENVPIAQMLETRFSLPVFIENDANAM
AMATLVFGQLGNAQSAVIATYGKGIGAGIILNRRLYRGRHGKAGEIGNGLVGDGSLRLLE
DVASSRAILQRVQQDEAGGPLTLQALDQRPTAEVLSALEEAGRELGISLANLSVAYDPDV
VFLAMEPHMASRILLDHITQSFQAYRLKLTPQTTPLQFLTESNRMWALGAAGFAVNMLLD
LLAAQADEEPVT
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgattgctccaaacgttaccgcgcgcattctgagactgatcgtggaacatgcgcctgtc
agccagtctgacctcaaggtccgaagcggactcagcatgtctaccgtctcccaggcgacc
aaccgactgctggcgcagggcatcgtccaggaactggggctgcgccgcgtatcaatgggg
cggcctaaaaccttgctggggctgaatcccgatcgcgccagcgtcattggcattcagctt
aacgccgagcgtaacctgatcgtaatgaccgacctcagcggcaatctgctgggggaacag
cagatgccttccggcgccatcacgccacgacagctgggcgatgcgctggctaaatttcta
cgcggcgtggaagaaaaacaggttggcgcgattggcctggccttatccggtttagtcgat
gccgaaaacggctactgtattcgttcgaaagtgctcgactgggagaatgtccctatcgcg
cagatgctggaaacacgcttttccctgccggtatttatcgaaaacgatgccaatgcgatg
gcgatggccaccctggtatttggccaactgggcaacgcgcagtcagcggttattgcgact
tacggtaaaggcattggcgcaggcattattcttaaccgccggctgtatcgcgggcgacat
ggcaaagcgggcgagatcggtaacggcctggtcggcgatggctcgctgcgtctgcttgag
gatgtggcctcgtctcgggcaatcctgcaacgtgtccagcaggatgaagcgggcggtccg
ctaacgttgcaggcgctcgatcagcggcccacggccgaggtgctgagcgcactggaagag
gcgggacgtgaactgggaatctccctggccaatctgtcggtggcgtacgatcctgacgtc
gtgttcctggcgatggaaccgcacatggcttcacgtattctgctggaccacattacccag
agttttcaggcctatcgtctgaagctgacgccacagacgacaccgctgcagtttctgaca
gaatcaaaccgcatgtgggcgctgggcgcggcaggctttgccgtgaatatgctgctcgat
ctgctggctgcccaggcggatgaagaacccgtgacctga
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