Planctomyces sp. SH-PL62: VT85_17890
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Entry
VT85_17890 CDS
T04401
Name
(GenBank) hypothetical protein
KO
K22109
HTH-type transcriptional regulator, glycine betaine synthesis regulator
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plh03000
]
VT85_17890
Transcription factors [BR:
plh03000
]
Prokaryotic type
Helix-turn-helix
Other families
VT85_17890
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GFIT
Motif
Pfam:
MarR_2
HTH_20
MarR
HTH_27
TrmB
HTH_11
HTH_34
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AMV39313
UniProt:
A0A142YJG4
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All DBs
Position
4553090..4553659
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AA seq
189 aa
AA seq
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MDSTISDGPIEGSPASLGADVLIRRFIEHWGMMARAWGINSTMGELFALLYITGSDWTAE
ELRSRLDVSRGNVSMNLRELLGWGVVRKAHRPGERRELYRAETDVWTLFQRIMTERKRRE
LDPTVKVLDDLARVAEEAPGLGELRSRLETLRSFLEAIDGLSVRLMALDSGDLAAIGKLL
AVDDDAELE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggattcgacgatctcggacggcccgatcgaaggctcgcccgcgagcctcggggccgac
gtcctgatccggcgcttcatcgagcactggggcatgatggcccgagcctgggggatcaat
tccacgatgggggagttgttcgccctgctctatatcacgggctccgactggaccgccgag
gaactccgatcgcggctggacgtctcccgcggcaatgtcagcatgaatctcagggagttg
ctcggctggggggtcgtccgcaaggcccaccggcctggcgagcgccgggaactctaccgc
gccgagaccgacgtctggaccctcttccagaggatcatgaccgagcggaagcgacgggaa
ctcgatcccaccgtgaaggtcctcgacgacctcgccagggtcgccgaggaggcccccggc
ctgggcgagctgcgcagccggctggagacgctccggagctttctggaggcgatcgacggg
ctctcggtgcggctcatggccctggattccggagacctggccgcgatcggcaagctcctg
gccgtcgacgacgacgccgagctggagtga
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