KEGG   Pseudomonas lijiangensis: KQP88_05285
Entry
KQP88_05285       CDS       T08713                                 
Symbol
cas6f
Name
(GenBank) type I-F CRISPR-associated endoribonuclease Cas6/Csy4
  KO
K19130  CRISPR-associated endonuclease Csy4 [EC:3.1.-.-]
Organism
plij  Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:plij00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:plij02048]
    KQP88_05285 (cas6f)
Prokaryotic defense system [BR:plij02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-F factors
    KQP88_05285 (cas6f)
SSDB
Motif
Pfam: Cas_Csy4 Cytidylate_kin2 ANTAR
Other DBs
NCBI-ProteinID: QWU84195
LinkDB
Position
complement(1202933..1203496)
AA seq 187 aa
MDHYLDLQLLPDPEFAATQLMSALMSKLHRGLHDLRRDDIGISFPAISGRATGLGDRLRL
HGSAQALDALMAQSWLTGMRDHVRVGELSPIPTDAQHRRVSRVQVDSNPERTRRRLIKRH
GLTEEQARERIPDSAAKRCNLPFVQMRSRTNGQTFLLFIRHEPIQSSAQDGTFNSYGLSA
TATVPWF
NT seq 564 nt   +upstreamnt  +downstreamnt
atggatcattacctcgacctgcaattactgcccgatccggagtttgcagccacgcaactg
atgagcgcactgatgtccaagttgcatcgcggcttgcatgacctgcgtcgcgatgacatc
ggcatcagcttccccgctatcagcggcagggctaccggcctgggcgaccgcctgcgcttg
cacggcagtgcgcaagcgctggatgccctgatggcccagagctggctgacgggcatgcgt
gaccatgtgcgagtaggcgaactgagcccgatccccactgacgcacagcatcggcgcgtc
agccgcgtgcaggtggacagcaacccggagcgcacaagacgacgcctgatcaaacgccac
ggcctcacggaagaacaagcccgcgaacgtatccccgacagcgccgcaaaacgctgcaac
ctgcccttcgtccagatgcgcagccgtaccaatggtcagacgttcctgctgttcatccgg
catgagccgatacagagcagcgcccaggatgggaccttcaatagctatgggttgagtgct
acggctactgttccctggttttga

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