KEGG   Pseudomonas lijiangensis: KQP88_05305
Entry
KQP88_05305       CDS       T08713                                 
Symbol
cas3f
Name
(GenBank) type I-F CRISPR-associated helicase Cas3f
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
plij  Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:plij00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:plij02048]
    KQP88_05305 (cas3f)
Enzymes [BR:plij01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KQP88_05305 (cas3f)
Prokaryotic defense system [BR:plij02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    KQP88_05305 (cas3f)
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C Cas3_HD DEAD HD
Other DBs
NCBI-ProteinID: QWU84199
LinkDB
Position
complement(1206978..1210340)
AA seq 1120 aa
MNILLICQCDKRALVETRRILDQFAERRGERTWQTPITQDGLDTLRRLLRKSARRNTAVA
CHWIRGLDHSELLWIVGDASRFNEQGAVPTNITRRNVLRKEDENDWHTAEDITLLAQMAA
LLHDLGKSSIAFQQRLQKQSREKNLYRHEWVSLRLFLAFVGRDSDETWLKRLAEPDSLDD
ESWLAEGRYLRDGLDPDTPPPFLDLPPLAAAIAWLVVTHHRLPTKPFKGDLGDEKLWFGK
PSRYVSPTSLANVLEGVTHEWNELKSPAEPVEIKPYWQFEHGLPVTLPKWRTQAAKVANR
LLTLQAKAGKGDWLNNPYVMHVARLSLMLADHHYSGLTVKSEQRVKGDAQCLLYANTEDG
KPKQKLDEHLLGVARLAGTIVHGLPGFERYLPRLAKHKGLRKRSGSGRFEWQDKASDAAT
SLRDKSFEHGAFIVNMASTGCGKTLANVRIMNALADPQLGFRCTFALGLRTLTLQTGASY
RQDLHLKEDELAVHVGGSASKALFKFHQKLAEQTGSGSVQALLEEDSHVLYEGQSSNHGL
LSKAMANQDIRSLLSAPMLVCTIDHLMPATEAQRSGRQIAPMLRMMSSDLVLDELDDFDL
PDLPALTRLMHWAGMLGTRVLLSSATLPPALVDGMFQAYRAGRMHYRRNRGAHDQQAYPP
SEVACLWVDEFSAHGMTCSDPQRFITEHEAFVQRRVEELGKAEPRRCGELIPLTIKAKKP
DAIRVEFASHVRSAMLEAHARHAETCPHSGKRVSFGLVRMANIEPLFDVALALFEAGAPE
DYRIHLCVYHSRFPQVLRSAIEAQLDTCLNRRKREAVYALPGIRQAIDQSPEQNHLFVVL
GSPVTEVGRDHDYDWAIVEPSSMRSLIQLAGRIQRHRNEPCKTPNVLIFDANLRHFEKPQ
AAAFVQPGFENKNGTLDDPFRLMTHRLGKLLKEDEYKTLTARPRIQPRPAQEWQAKKSLV
DLEHKRLAAQMLPKDHNPASKSTFNLDAACAWQYSQASLTWILPQHQPFREQTTPQTELV
FLPDEDEEQLVLHRIHEEAKRGKPEIYTLAQDQLTEIDLDSLLGPRITPWGRHDLMELLV
EQAEAQDLSLRKCAERFTSVSVHESWFGWRYHPVLGFGKA
NT seq 3363 nt   +upstreamnt  +downstreamnt
gtgaatatcctgcttatctgccagtgcgacaagcgagcgctggtggaaacccggcgtatt
ctggatcagttcgccgaacgtcgcggcgagcggacctggcaaacgccgatcactcaagac
ggcctcgacaccttgcgtcgcctgctgaggaaaagcgcacgccgcaacacggcggtggcc
tgtcactggatcagagggctggaccatagcgagttgctgtggatcgttggcgatgccagt
cgcttcaatgaacagggcgctgtaccgaccaacattacgcgacgcaatgtgctgcgcaag
gaagatgaaaacgattggcacaccgccgaagacatcaccttgctggcgcagatggcggcg
ttgctgcatgaccttggcaaatccagcatcgcgtttcagcaacgcctgcaaaaacagagc
cgtgagaaaaacctttatcgccacgagtgggtttcgctgcggctttttctggcattcgtc
gggcgcgactccgacgaaacctggcttaaacgtctggccgaacccgactcactggacgac
gaaagctggctggctgaaggccgttatctacgcgatggccttgaccccgacacaccacct
ccttttctcgacttgcctcctttggcggcagcgattgcctggctggtcgtgactcaccat
cgcttgccgacaaagcctttcaagggggacttgggcgacgaaaaactctggttcggcaag
ccttcgcgttatgtgtccccgacctctctggccaatgtgctggagggcgtcacccatgag
tggaacgagctgaaaagccctgccgaaccggttgagataaagccttattggcaattcgag
catggtttaccggtcacactgcccaaatggcgcacccaggcagcaaaagttgcaaaccgg
ctgctgacgctacaagccaaggcaggcaaaggcgactggctgaataacccttatgtcatg
catgtggcacgcctgagtctgatgctggctgaccaccattactccgggctaacggtcaaa
tcagaacagcgcgtcaaaggcgatgcgcaatgcctgctctacgccaataccgaagacggc
aaacccaaacagaaactggatgagcacttgctgggcgtggcgcgtctggcgggcaccatc
gttcatgggctgccgggtttcgaacgttatctgccgcgccttgccaagcacaaagggctg
cgcaaacgcagtggctcgggtcgcttcgagtggcaggacaaagccagcgatgccgccacc
agcctgcgggacaagtcattcgagcatggggcgttcatcgtcaatatggcttcgactggt
tgcggcaagaccctggccaacgttcgtatcatgaatgccctggccgatccgcaactgggg
tttcgctgcaccttcgccctggggctgcgcacgctgacgctgcagaccggagccagttat
cgtcaggatctgcacctcaaggaagacgaactggccgtgcatgtcggcggctcggccagc
aaagccttgttcaagtttcaccagaagctggcggagcaaaccggctcgggctcggtgcag
gcgttgctcgaagaagacagccacgtcttgtacgagggacagtcgagcaatcacggcctc
ttatccaaagccatggctaatcaggacatacgttcgctgctcagcgcccccatgctggtc
tgcaccatcgatcacctgatgcccgccaccgaggctcagcgctcgggacgtcagattgcg
ccgatgctgcgcatgatgagcagcgatctggtgcttgatgagctggacgacttcgacttg
cctgatttgcccgccctgacccgtctgatgcattgggccggcatgctcggaacgagagtt
ttactctcttcggcaacgttgccacccgccctggttgacggaatgttccaggcctatcgt
gcaggccgtatgcattaccgacgcaaccgcggcgcccatgaccagcaggcttatccgcca
tccgaggtggcttgcctgtgggtggatgaattcagcgcccacggcatgacctgcagtgat
ccccaacgctttattaccgagcatgaagcgttcgtacaacgtcgcgttgaagaactgggc
aaagccgaaccgcgaagatgcggtgagctgataccactgacgatcaaagccaaaaaaccg
gacgccattcgtgtcgagttcgccagccatgtgcgcagcgccatgcttgaagcccatgcc
cgacacgccgaaacctgcccccacagcggcaagcgggttagcttcggtctggtgcgcatg
gccaatatcgaacccttgttcgatgtggcgctggcgttatttgaggctggcgcgcctgag
gattaccgcattcatttatgcgtctaccactcgcgttttccgcaagtgctgcgctcagcc
atcgaagcgcaactggacacctgcctgaaccggcgcaagcgtgaagcggtttatgcgcta
ccaggaattcggcaagccatcgatcagtctcccgagcagaaccatctgtttgtggtgctg
ggttcacccgtgactgaagtcggtcgcgatcacgattatgactgggccatcgtcgagcct
tcgtccatgcgctcgctcattcaactggccgggcgcatacagcggcatcgcaacgaaccg
tgcaagacgcccaatgtgcttattttcgatgccaatttgcggcacttcgagaagccgcag
gcagccgcttttgtgcaaccgggtttcgagaacaaaaatggcacgcttgatgatccgttc
aggctgatgacccatcggctcggcaagctgctgaaagaggatgaatacaagaccctgaca
gcccgcccacgtatccagccgcgcccggctcaggagtggcaagccaagaaaagtctggtg
gacctcgaacataaacggcttgccgcacagatgctgcccaaggatcacaacccggcatcg
aaatcgacattcaacctggatgcggcctgcgcctggcaatattcacaggcttcgctgacc
tggatcctgccgcaacatcagcccttccgcgaacagaccacgccgcaaaccgaactggtg
tttctgcctgacgaagacgaagaacagcttgtgctgcatcgcattcatgaagaggccaaa
cgcggcaagcccgagatttataccctcgcacaagaccaactcaccgagatcgacctcgac
agcctgcttggcccacggataacaccttggggtcgacacgatttgatggagctgcttgtt
gaacaggcggaggcacaggacctgtcactgaggaaatgcgccgagagattcacgtcggtc
agcgtgcatgagagctggtttgggtggaggtatcacccggttttgggatttgggaaagcc
tga

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