Pseudomonas lijiangensis: KQP88_08500
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Entry
KQP88_08500 CDS
T08713
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KQP88_08500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_08500
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KQP88_08500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QWU84785
LinkDB
All DBs
Position
1950934..1951818
Genome browser
AA seq
294 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDKRSMDPVGYKRINKVTGKEVKSPN
IVKGVEYEKDRYVVLSEEEIRSAHPRATQTIEIFGFVDSQQIPLQNIDTPYYLAPDKRGG
KVYALLRETLKDTQKVALANVVLHTREHLAAVMPLESALVLVILRWPADVRGLDELELTE
EVTEVSLTKSERDMAKRLVKDMSAEWQPDEYRDTFQEKIMHLVETKAREGSIENVGTDSG
EDERQSADVIDLTDLLRRSLAGKSTAKSSKPASKGKPRPPAKQRPATRKTSKAS
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcaagggcaatatggaaaggagcgatcagtttcgggctggtgcatattccggtggcg
ctggtatcggcgacttcgtcccagggtgtcgatttcgactggctcgacaagcgcagcatg
gacccggttggctataagcggatcaacaaggtcacgggcaaggaggtgaagagccccaac
atcgtcaagggtgtggagtatgagaaggatcgctatgtcgtactcagcgaagaggaaatt
cgctctgctcacccgcgagcgacacagaccatcgagattttcggtttcgtcgatagccag
cagattcctttgcagaacatcgacacaccttattacctggccccggacaaacggggcggc
aaggtctatgccctgctacgcgaaaccctgaaggacacccaaaaggtggccttggccaat
gtagtgcttcacacccgtgaacatctggctgccgtcatgcctctggagtcagcattggtg
ctggtgattctgcgctggccggctgatgtgcgagggctcgacgagctcgaactgaccgaa
gaggtgacggaggtttccctgaccaagagcgaacgtgacatggccaagcgtctggtcaag
gacatgagcgccgagtggcagcccgacgagtaccgcgacacctttcaggaaaagatcatg
cacctggtcgaaaccaaggcgcgggaaggcagtattgaaaatgtgggcaccgatagcggc
gaagacgaacgccagagcgccgatgtcatcgacctgaccgatctgctcaggcgcagcctg
gcaggcaagagcaccgcgaagagcagcaagccggccagcaaaggcaaaccccggccgcca
gccaaacagcgtccagcgaccaggaaaaccagcaaggcttcctga
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