Candidatus Planktophila limnetica: PHILAsVB114_04835
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Entry
PHILAsVB114_04835 CDS
T05067
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
plim
Candidatus Planktophila limnetica
Pathway
plim00260
Glycine, serine and threonine metabolism
plim01100
Metabolic pathways
Module
plim_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
plim00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PHILAsVB114_04835
Enzymes [BR:
plim01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
PHILAsVB114_04835
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
Pyr_redox_3
FAD_binding_2
DAO
Pyr_redox_2
Lycopene_cycl
NAD_binding_8
HI0933_like
Thi4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ASY27950
UniProt:
A0A249LFQ1
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All DBs
Position
complement(921539..923188)
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AA seq
549 aa
AA seq
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MSAQYDYIIVGGGSAGCALANRLSENPAHKVLVLEAGRRDYKWDVFIHMPAALAFPIGSK
FYDWMYESEPEPFMNGRKIYHARGKVLGGSSSINGQIWQRGNALDYERWSKDQGMHNWDY
AHCLPYFKKLENCLADPKNPFRGDSGPLKLERGPVKGPLFAAFFKATEQAGYPRTDDVNG
YRQEGFAAFDRNVYRGRRLSAARAYLYPVLKRKNLTLKTRAHVTKVLFEGATATGVEVMI
KGKKHTFTSKEVILCGGAINTPQVLQLSGIGNQEDLSKLGIKVIKHLPGVGANLQDHLEV
YVQYKCKQPVTQQPITQMWRRPFIGAAWLFFRKGPGATNQFEAGGFTRSNEDVAYPNLMF
HFLPLAIRYDGSGPTSGHGYQVHVGPMYSDARGWLKIKSTNPFDKPAIQFNYLSTDQDRR
EWVEAVRVARNILTQPAMDDFNEGETSPGASVSTDEEVLEWVRKDAETALHPSCTAKMGT
DEMSVVDPETMKVHGVNGLRIADASVFPYVTNGNIYAPVMMVAEKAADLILGNTPLPAEN
IEFYRHVKR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcagtatgactacatcatcgttggtggtggttcagcaggttgtgcgctggca
aatcgcctcagtgaaaatcctgcacataaagttttagttctagaagctgggcgccgtgat
tacaagtgggatgtatttatccatatgccggcagcgctggcctttcccattggcagcaag
ttctatgactggatgtatgaatccgagccagaaccatttatgaatggtcgcaagatttat
cacgcacgtggaaaagttttaggtggttcatcttctattaacggtcagatctggcaacgt
ggaaacgcgctcgattacgagcgctggtctaaagatcaaggtatgcacaattgggattac
gcgcactgcttgccatattttaaaaagttagagaattgtttagcagatccaaagaatcca
tttcgtggagatagtggcccacttaaattagaacgcggaccagttaaaggtcccctcttt
gctgccttctttaaggctacagagcaggcgggatatccacgcacagatgatgtcaacgga
tatcgccaagagggatttgcagcatttgatcgcaatgtctatcgcggtcgtcgtttaagc
gcggctcgtgcatatttgtatccagtccttaaacgcaagaacctcacgcttaaaactaga
gcgcatgtgactaaggttttatttgagggcgcaactgctactggtgttgaagtaatgatc
aagggcaagaaacacacctttacatctaaggaagttattttatgtggtggagcaattaat
accccacaagttttgcaattatcgggtatcggcaaccaagaagatctctcaaagcttggg
attaaagttattaagcatttgcctggtgtgggtgctaatttacaagatcaccttgaggtg
tatgttcagtacaagtgcaagcagcctgtaacacaacaacccatcacacaaatgtggcgc
cgtccatttattggcgcagcatggttattttttagaaaaggcccaggtgctactaatcaa
tttgaagcaggtggctttacacgaagcaatgaagatgttgcttatccaaacttgatgttt
cacttcctacctcttgcaattcgctatgacggcagcggcccaacaagtggtcacggatac
caagtacacgtgggtccaatgtattcagatgcacgtggatggctaaagattaagagcacc
aatccatttgataagcctgcaattcaatttaattatctttcaacagatcaagatcgtcgc
gaatgggttgaagccgtgcgcgttgctcgcaatatcttgactcaacctgcgatggatgat
ttcaacgaaggagaaacatctcctggtgcatctgtttcaacagatgaagaagtgctggaa
tgggtacgcaaagacgcagaaacagctctgcatccatcctgcacagcaaagatgggcacg
gatgaaatgtctgttgttgatccagagactatgaaggttcatggagtaaatggtctacgt
attgctgatgcatctgttttcccatatgtcacaaacggaaatatttacgcacccgtgatg
atggttgcagaaaaggctgcagatttaattcttggcaatactccattgccagctgaaaat
attgagttttaccgccatgtcaaaagatga
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