Polaribacter litorisediminis: K8354_01645
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Entry
K8354_01645 CDS
T07786
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
plit
Polaribacter litorisediminis
Brite
KEGG Orthology (KO) [BR:
plit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plit03009
]
K8354_01645
Enzymes [BR:
plit01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
K8354_01645
Ribosome biogenesis [BR:
plit03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K8354_01645
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
GNVR
Motif
Other DBs
NCBI-ProteinID:
UAM98558
LinkDB
All DBs
Position
complement(384489..385523)
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AA seq
344 aa
AA seq
DB search
MQENDSRDLENDDLYEHYRFTANVGQEPLRVDKFLMNFIENATRNKIQQAAKAGNIFVND
LVVKSNYKVKPKDVVKVVLAYPPAENLLVAEAIPLDIVFEDDTVIVVNKPAGMVVHPGHG
NYSGTLVNGLIHHIENLPTNSNERPGLVHRIDKDTSGLLVVAKTEFAMAHLSKQFFDRTT
ERFYYALVWGNVEEDEGRIEGNIGRSLKNRLQMAVFPDADFGKHAVTHYKVLERLTYVTL
VQCKLETGRTHQIRAHFKHIGHTLFNDERYGGDDILKGTTFTKYKQFVHNCFKVLPRQAL
HAKTLGFTHPKTGEFMQFNSEVPQDITDCLEKWRTYSENSKEEF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagaaaacgattctcgagatttagaaaatgatgatttgtatgaacattacagattt
acagcaaatgttggtcaagaacctctgcgtgttgataaatttttgatgaatttcatagaa
aatgctaccagaaataagatacaacaagctgcgaaagctggaaatatttttgtaaatgat
cttgttgtaaaatcgaattataaagtaaaacctaaggatgttgtaaaagtagttttagcg
tatccgccagcagaaaacttattggttgccgaggctattcctttagatattgtttttgaa
gatgatactgtaattgtagtgaataaacctgccggaatggtggtgcatcctggtcacgga
aattattctggaaccttagtaaatggcttaattcatcatatagaaaatttacctacgaat
tctaatgagcgccctggtttggtgcatcgaattgataaagacacgagcggattgttagtg
gttgctaaaaccgaatttgctatggcacatttatcaaaacaattttttgacagaaccaca
gaacggttctactatgccttagtttggggaaatgttgaagaggatgaaggccgcattgaa
ggaaatataggtcgaagtttaaaaaatcgtttgcaaatggctgtctttcctgatgccgat
ttcggaaaacatgccgtaacgcattataaggttttagagcgcttaacttatgtaactttg
gttcaatgcaagttagaaacagggagaacgcatcaaataagagcccattttaaacatatt
ggtcataccctttttaatgacgaacgttatggaggtgatgacattttaaaaggaacaacc
tttacaaaatacaaacaatttgttcacaattgctttaaagtgcttccaagacaagctttg
catgcaaaaactctcggttttacgcatcctaaaactggagaatttatgcagtttaattca
gaagttcctcaagatattacagattgtttagaaaaatggagaacgtatagtgaaaattct
aaagaagaattttaa
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