Planctopirus limnophila: Plim_3577
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Entry
Plim_3577 CDS
T01225
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
Organism
plm
Planctopirus limnophila
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ADG69390
UniProt:
D5SVN0
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Position
4607581..4608147
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AA seq
188 aa
AA seq
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MQVPLLTRIANGDTGAVDECIDRYGGLVWSLARRLSSSLADAEDAVQEVFVDLWKNADRY
RGEIAGEATFVAMIARRRLIDRLRKSGRELESRPIDELALQHAAPLQTSPVELAEEVAQA
AACLERLRKDERKVLELSIYHGLPQTRIANQTGLALGTVKTIARRGLLQLRVCMQVRNQR
RANEVEVV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagtcccgcttttaacccgcattgccaacggtgataccggagcggttgatgaatgt
atcgaccgctatggtgggctcgtgtggtcgctcgcccgccgactctcctcttcattagct
gatgctgaagacgccgttcaggaagtcttcgtggacttgtggaagaatgcggatcgttat
cgcggggagattgctggtgaggcgacctttgtggcaatgatagcgcggcggcgtttgatt
gatcggctccgcaagtccggacgcgagttggaatcacgaccgatcgatgagcttgctttg
caacatgcggctcccctgcagacttcccccgtagaattggcggaagaagtagcccaagct
gcggcttgtctggagaggctgcgaaaagatgaacggaaagtgctggaactctcgatctat
catggcttgccgcaaacgcgaatcgccaaccaaacggggctggcactgggcacagtgaaa
accattgcacgacgcgggttgttacaactccgagtttgcatgcaagtccgcaaccagcga
cgtgcgaatgaagttgaggtcgtatga
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